RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PRPSAP1Q14558 356 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 TPTE2P1Q5T6R2 138 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 PLET1Q6UQ28 207 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 FBXW12Q6X9E4 464 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 MBOAT2Q6ZWT7 520 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 AHSA2Q719I0 299 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM150AQ86TG1 271 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 NECAP1Q8NC96 275 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR10AD1Q8NGE0 317 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR10W1Q8NGF6 305 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR2A1Q8NGT9 310 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 UBA3Q8TBC4 463 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 C15orf40Q8WUR7 153 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 L3HYPDHQ96EM0 354 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 PIK3IP1Q96FE7 263 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 NARS2Q96I59 477 aaKnown RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 ADTRPQ96IZ2 230 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 RNF145Q96MT1 663 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 C7orf50Q9BRJ6 194 aaKnown RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 SRRQ9GZT4 340 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 WDR54Q9H977 334 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 MRM3Q9HC36 420 aaKnown RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 FBXO8Q9NRD0 319 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 NLE1Q9NVX2 485 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 FADS3Q9Y5Q0 445 aa2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.13□□□□□ -2.07
HMGB1P49-201ENST00000418882 SBNO1A3KN83 1393 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 LRPPRCP42704 1394 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 PTPRTO14522 1441 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 IGLV1-50A0A075B6I6 118 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 A0A0U1RQV1 116 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ANKRD20A5PA0PJZ0 165 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ANKRD65E5RJM6 399 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 CLDN34H7C241 214 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 DFFAO00273 331 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 DYNC1I1O14576 645 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TOX3O15405 576 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 AQP9O43315 295 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ENSAO43768 121 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 SHOX2O60902 331 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 EIF4EP06730 217 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 RHOCP08134 193 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 PSKH1P11801 424 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TCP1P17987 556 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ATF6P18850 670 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 GGT1P19440 569 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 RBM34P42696 430 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 GALR1P47211 349 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR10A3P58181 314 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 MAPRE2Q15555 327 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TIMM23BQ5SRD1 257 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 CPTPQ5TA50 214 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 UBE2UQ5VVX9 321 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 MFSD14CQ5VZR4 134 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 PTRHD1Q6GMV3 140 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ARL9Q6T311 187 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 NPSR1Q6W5P4 371 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 Q6ZT83 130 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 PEX26Q7Z412 305 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM135Q86UB9 458 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 PLCZ1Q86YW0 608 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 RNF10Q8N5U6 811 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR52E2Q8NGJ4 325 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR8U1Q8NH10 309 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR51E1Q8TCB6 317 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 RNASEH2CQ8TDP1 164 aaKnown RBP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 APH1BQ8WW43 257 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 DNAJB3Q8WWF6 145 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ANKRD7Q92527 254 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 SGTBQ96EQ0 304 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 WDR34Q96EX3 536 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 FAM210AQ96ND0 272 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZFP3Q96NJ6 502 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 C20orf144Q9BQM9 153 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TIMM29Q9BSF4 260 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 REEP1Q9H902 201 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 UCK1Q9HA47 277 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 IFT46Q9NQC8 304 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 TREX1Q9NSU2 369 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 DDIT4Q9NX09 232 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 HMGXB4Q9UGU5 601 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 HYOU1Q9Y4L1 999 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR51B2Q9Y5P1 312 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 S4R3C0 116 aa2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 AQRO60306 1485 aaKnown RBP eCLIP2.12□□□□□ -2.07
HMGB1P49-201ENST00000418882 KIR2DS1A0A191URI9 304 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZW10O43264 779 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 PSIP1O75475 530 aaKnown RBP2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 MYO1DO94832 1006 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 TNFAIP8O95379 198 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 RAB3DO95716 219 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 CCNE2O96020 404 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR8U9P0C7N5 309 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR5H8P0DN80 308 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 THRAP10827 490 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 CD37P11049 281 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 HOXA6P31267 233 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 COILP38432 576 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 XKP51811 444 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms