RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RANP62826 216 aaKnown RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 PRDX4Q13162 271 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 CLPPQ16740 277 aaPredicted RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 LINC01465Q8N7H1 131 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 ZNF205O95201 554 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 WNT11O96014 354 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 IL3RAP26951 378 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 GFERP55789 205 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 LGALS4P56470 323 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 RTL8BQ17RB0 113 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 NOXO1Q8NFA2 376 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 CLDN23Q96B33 292 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 MIXL1Q9H2W2 232 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 AMDHD2Q9Y303 409 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 ARID1BQ8NFD5 2236 aaPredicted RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 LINC01553A4QN01 128 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 HSBP1O75506 76 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 OR5AC1P0C628 307 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 SPNS3Q6ZMD2 512 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 SLC35B3Q9H1N7 401 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 HSF4Q9ULV5 492 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 IGHV3-13P01766 116 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 IGHV3-7P01780 117 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 S100A7P31151 101 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 PPICP45877 212 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 GNG10P50151 68 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 SRSF5Q13243 272 aaKnown RBP10.8□□□□□ -0.68
UBR4-205ENST00000417040 TAAR6Q96RI8 345 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 FOXQ1Q9C009 403 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 SLC2A8Q9NY64 477 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 FBXL17Q9UF56 701 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 SIGLEC7Q9Y286 467 aa10.8□□□□□ -0.68
UBR4-205ENST00000417040 TRBV5-4A0A0C4DH59 114 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 LANCL1O43813 399 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 SCGB1C2P0DMR2 95 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 NKAIN1Q4KMZ8 207 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TSPO2Q5TGU0 170 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CISD2Q8N5K1 135 aaKnown RBP10.79□□□□□ -0.68
UBR4-205ENST00000417040 OR4D9Q8NGE8 314 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 OR2A1Q8NGT9 310 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 BLNKQ8WV28 456 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 GPR137Q96N19 417 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 S1PR3Q99500 378 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CNTD2Q9H8S5 307 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 LIPGQ9Y5X9 500 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ANKRD20A5PA0PJZ0 165 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 GEMIN2O14893 280 aaKnown RBP10.79□□□□□ -0.68
UBR4-205ENST00000417040 RGS13O14921 159 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 SPP1P10451 314 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ABCD3P28288 659 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CEBPEQ15744 281 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ZNF793Q6ZN11 406 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 OR6S1Q8NH40 331 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 NAT6Q93015 286 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TSPAN32Q96QS1 320 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TAAR9Q96RI9 348 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 DYNLT3P51808 116 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CLDN15P56746 228 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TCTAP57738 103 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ALKBH3Q96Q83 286 aaPredicted RBP10.79□□□□□ -0.68
UBR4-205ENST00000417040 A0A087WUJ7 227 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 C4orf47A7E2U8 309 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 AP4M1O00189 453 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CST2P09228 141 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 CEACAM6P40199 344 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 RRADP55042 308 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ZNF573Q86YE8 665 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 EXTL1Q92935 676 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 SARGQ9BW04 601 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 GHRLQ9UBU3 117 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 LRRC30A6NM36 301 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 FCN1O00602 326 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 GALR2O43603 387 aaPredicted RBP10.79□□□□□ -0.68
UBR4-205ENST00000417040 DPTQ07507 201 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 TGIF2LXQ8IUE1 241 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 ARHGEF39Q8N4T4 335 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 SPICQ8N5J4 248 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 IL20Q9NYY1 176 aa10.79□□□□□ -0.68
UBR4-205ENST00000417040 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 FZD6O60353 706 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 RPS19BP1Q86WX3 136 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 NPAS1Q99742 590 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 UQCC1Q9NVA1 299 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 MTFP1Q9UDX5 166 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 MASP2O00187 686 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 CCL2P13500 99 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 ERHP84090 104 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 FAM3AP98173 230 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 EXT1Q16394 746 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 PNLIPRP3Q17RR3 467 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms