RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FAHP16930 419 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ANOS1P23352 680 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 HTR5AP47898 357 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 MEOX1P50221 254 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 CXADRP78310 365 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 PSG4Q00888 419 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 LY6DQ14210 128 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 RNPS1Q15287 305 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 UBE2V2Q15819 145 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 C4orf46Q504U0 113 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 LPCAT3Q6P1A2 487 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 FAHD2BQ6P2I3 314 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 LINC00696Q6ZRV3 163 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 SLC7A5P1Q8MH63 180 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 TMEM251Q8N6I4 163 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 OR11H4Q8NGC9 324 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ABHD3Q8WU67 409 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 TNFAIP8L1Q8WVP5 186 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 FAHD2AQ96GK7 314 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 REEP6Q96HR9 211 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 SPACA5Q96QH8 159 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 WNT5BQ9H1J7 359 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 POFUT1Q9H488 388 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ZMAT3Q9HA38 289 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 BCO1Q9HAY6 547 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 ACKR4Q9NPB9 350 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 PIPOXQ9P0Z9 390 aa9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 EIF3KQ9UBQ5 218 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-201ENST00000379340 A0A0A6YYD4 124 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 OR14I1A6ND48 311 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SERPINE3A8MV23 424 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF587BE7ETH6 402 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 MFNGO00587 321 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 LCATP04180 440 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 IFNA6P05013 189 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 OR4E1P0C645 316 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 COX5BP10606 129 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 FCGR2AP12318 317 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 CPT2P23786 658 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 MAGEA5P43359 124 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 TSPAN5P62079 268 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SNRPD2P62316 118 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SRSF1Q07955 248 aaKnown RBP eCLIP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SNAI3Q3KNW1 292 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 CLVS2Q5SYC1 327 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 ATPAF1Q5TC12 328 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 LHFPL2Q6ZUX7 228 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 DTX1Q86Y01 620 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 MUC20Q8N307 709 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 C12orf45Q8N5I9 185 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 ZFP62Q8NB50 900 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 UXS1Q8NBZ7 420 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 TMEM104Q8NE00 496 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 OR51T1Q8NGJ9 327 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SNIP1Q8TAD8 396 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 NUDCD2Q8WVJ2 157 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SNAPC3Q92966 411 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 CMBLQ96DG6 245 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SLC6A7Q99884 636 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 OCSTAMPQ9BR26 566 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 NICN1Q9BSH3 213 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 PRDM14Q9GZV8 571 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 SLC6A15Q9H2J7 730 aa9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 ELF5Q9UKW6 265 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-201ENST00000379340 C5orf63A6NC05 138 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 FAM166BA8MTA8 275 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 HMSDA8MTL9 139 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 F5H5P2 479 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 G3V3Q6 166 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SSX5O60225 188 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 MMP7P09237 267 aaPredicted RBP9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 MGMTP16455 207 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 PER3P56645 1201 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 TAS2R31P59538 309 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 UBE2MP61081 183 aaKnown RBP9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 IKZF1Q13422 519 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 RTP5Q14D33 572 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SCGB2B2Q4G0G5 96 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SLC22A6Q4U2R8 563 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 VAX1Q5SQQ9 334 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 TSPO2Q5TGU0 170 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 TMEM42Q69YG0 159 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 GALNTL5Q7Z4T8 443 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 DPPA2Q7Z7J5 298 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SLC25A42Q86VD7 318 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SKA3Q8IX90 412 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SPACA3Q8IXA5 215 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 FTMTQ8N4E7 242 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 ARRDC1Q8N5I2 433 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 TMEM178AQ8NBL3 297 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 OR52B4Q8NGK2 314 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 AKR7LQ8NHP1 331 aa9.12□□□□□ -0.95
POLR2J3-201ENST00000379340 SCGB3A2Q96PL1 93 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms