RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 GPR27Q9NS67 375 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 ATPIF1Q9UII2 106 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 GLRA1P23415 457 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 GNG3P63215 75 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 ATP1A1-AS1Q5TC04 95 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 NFAM1Q8NET5 270 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 MRPL22Q9NWU5 206 aaKnown RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 A0A0D9SG52 128 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 SH2D1BO14796 132 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 IFITM3Q01628 133 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 CD200R1LQ6Q8B3 271 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 RFPL4BQ6ZWI9 263 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 ADPRHL1Q8NDY3 354 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 OR10J5Q8NHC4 309 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 SEH1LQ96EE3 360 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 HES7Q9BYE0 225 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 DECR2Q9NUI1 292 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 QPCTLQ9NXS2 382 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 K7EPK0 472 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 ZMYND11Q15326 602 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 PNLIPRP3Q17RR3 467 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 FAM122BQ7Z309 247 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 LGI3Q8N145 548 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 FAM71E2Q8N5Q1 922 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 OR6K3Q8NGY3 331 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 PGLYRP3Q96LB9 341 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 TSNAXQ99598 290 aaKnown RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
TCOF1-202ENST00000377797 SF3B6Q9Y3B4 125 aaKnown RBP12.8□□□□□ -0.36
TCOF1-202ENST00000377797 LOC101059948A0A1B0GTJ6 334 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 IFNA2P01563 188 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 HIST1H1DP16402 221 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 FCGR2CP31995 323 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 C20orf196Q8IYI0 205 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 OR52B4Q8NGK2 314 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 FLVCR1Q9Y5Y0 555 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 ATP23Q9Y6H3 246 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 CTXN2P0C2S0 81 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PGA4P0DJD7 388 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PGA3P0DJD8 388 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 FUT3P21217 361 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 OR2AK2Q8NG84 335 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF519Q8TB69 540 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PCNPQ8WW12 178 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 CHCHD2Q9Y6H1 151 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 POM121CA8CG34 1229 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TTRP02766 147 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 CA6P23280 308 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 SRPXP78539 464 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PRDX4Q13162 271 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 CSRP2Q16527 193 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TICRRQ7Z2Z1 1910 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 TUSC2O75896 110 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PMP22Q01453 160 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 ROM1Q03395 351 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 RGS7BPQ6MZT1 257 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 OR51H1Q8NH63 302 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 IMMP1LQ96LU5 166 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 NXF2Q9GZY0 626 aaKnown RBP12.79□□□□□ -0.36
TCOF1-202ENST00000377797 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
TCOF1-202ENST00000377797 SPINT2O43291 252 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 PNPP00491 289 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 RAB6AP20340 208 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 S100A11P31949 105 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 FAM27BQ5VT28 67 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ADAT3Q96EY9 351 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-202ENST00000377797 OR2H1Q9GZK4 316 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 EIF5A2Q9GZV4 153 aaKnown RBP12.78□□□□□ -0.36
TCOF1-202ENST00000377797 MEIKINA0A087WXM9 373 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 PPP3CBP16298 524 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 GZMKP49863 264 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF83P51522 516 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 LINC00114Q6XXX2 140 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 CYB5R1Q9UHQ9 305 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-202ENST00000377797 FBXO24O75426 580 aa12.78□□□□□ -0.36
TCOF1-202ENST00000377797 ZFP36L1Q07352 338 aaKnown RBP12.78□□□□□ -0.36
TCOF1-202ENST00000377797 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-202ENST00000377797 C17orf107Q6ZR85 190 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms