RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 TRAV8-7A0A075B6U6 113 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 KIR2DS1A0A191URI9 304 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 KCNK1O00180 336 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC1A7O00341 560 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ACOT8O14734 319 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 EPHB6O15197 1021 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 DCTN3O75935 186 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SUPT7LO94864 414 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 NDUFB4O95168 129 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 NDUFB8O95169 186 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 FGF19O95750 216 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CD160O95971 181 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 HPP00738 406 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 HTR1AP08908 422 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 HOXC4P09017 264 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 PRSS56P0CW18 603 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 H2AFXP16104 143 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 GZMHP20718 246 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CXCR1P25024 350 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 GJB2P29033 226 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 PSMD8P48556 350 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CLDN12P56749 244 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 DNAJB13P59910 316 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 GTF2BQ00403 316 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SRYQ05066 204 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 PRKCDQ05655 676 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC10A7Q0GE19 358 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 MYBPHQ13203 477 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CEACAM7Q14002 265 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CTTNQ14247 550 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 KIR2DS1Q14954 304 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF74Q16587 644 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF284Q2VY69 593 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SNAI3Q3KNW1 292 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CEACAM21Q3KPI0 293 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ARHGAP11BQ3KRB8 267 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 EIPR1Q53HC9 387 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 WDR25Q64LD2 544 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC34A3Q8N130 599 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SVOPLQ8N434 492 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SCCPDHQ8NBX0 429 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 TNFAIP8L1Q8WVP5 186 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SSMEM1Q8WWF3 244 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ASB17Q8WXJ9 295 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 RAB8BQ92930 207 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 BPIFA2Q96DR5 249 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SMIM19Q96E16 107 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ATXN7L3BQ96GX2 97 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 TXNDC15Q96J42 360 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 KCTD7Q96MP8 289 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 OR5M11Q96RB7 305 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ATP5SQ99766 215 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 TRIM51Q9BSJ1 452 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 TMEM208Q9BTX3 173 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 UGT2B28Q9BY64 529 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 NEUROG2Q9H2A3 272 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SEBOXQ9HB31 216 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SLC52A3Q9NQ40 469 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 NIT2Q9NQR4 276 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 VPREB3Q9UKI3 123 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 ANGPT4Q9Y264 503 aa4.32□□□□□ -1.72
ECHDC1-204ENST00000368292 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 TMEM272A0A1B0GTI8 110 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 ASPDHA6ND91 283 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 PPP5D1E7EU14 171 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 J3KR12 359 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 J3QR06 171 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 K7EM74 188 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 MSH4O15457 936 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 RAD51CO43502 376 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 ENSAO43768 121 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 MPZL2O60487 215 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 ENTPD6O75354 484 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 STK17BO94768 372 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 S1PR2O95136 353 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 EML2O95834 649 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 CD74P04233 296 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 IGF1P05019 195 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 SMIM18P0DKX4 95 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 HAPLN1P10915 354 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 SPI1P17947 270 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 MAOAP21397 527 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 HRH2P25021 359 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 QARSP47897 775 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 GCLMP48507 274 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 MAZP56270 477 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 CLDN20P56880 219 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 CD81P60033 236 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 LAMTOR4Q0VGL1 99 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 UBE2V1Q13404 147 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 TWIST1Q15672 202 aa4.31□□□□□ -1.72
ECHDC1-204ENST00000368292 ISXQ2M1V0 245 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms