RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 NANOS1Q8WY41 292 aaKnown RBP15.88■□□□□ 0.13
USP39-201ENST00000323701 ZNF221Q9UK13 617 aa15.88■□□□□ 0.13
USP39-201ENST00000323701 ANKRD20A5PA0PJZ0 165 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 ZNF850A8MQ14 1090 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 H7C417 338 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 SPRY1O43609 319 aaPredicted RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 ANGPTL7O43827 346 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 GIFP27352 417 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 UBE2NP61088 152 aaKnown RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 C6orf183Q5T699 404 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 OLFML2AQ68BL7 652 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 ZNF474Q6S9Z5 364 aaPredicted RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 DOLPP1Q86YN1 238 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 CAPSLQ8WWF8 208 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 DVL3Q92997 716 aaPredicted RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 SEH1LQ96EE3 360 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 WBP1Q96G27 269 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 HRASLSQ9HDD0 168 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 MTFP1Q9UDX5 166 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 TINAGQ9UJW2 476 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 ING4Q9UNL4 249 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 KALRNO60229 2985 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 ZNF816-ZNF321PA0A0X1KG74 233 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 SOCS1O15524 211 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 SNTB2Q13425 540 aaKnown RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 PLET1Q6UQ28 207 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 DPPA2Q7Z7J5 298 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 BHLHE23Q8NDY6 225 aa15.87■□□□□ 0.13
USP39-201ENST00000323701 TP63Q9H3D4 680 aaPredicted RBP15.87■□□□□ 0.13
USP39-201ENST00000323701 CRTAPO75718 401 aaPredicted RBP15.86■□□□□ 0.13
USP39-201ENST00000323701 GNB3P16520 340 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 PRSS3P35030 304 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 ERVS71-1P61550 626 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 MRPS10P82664 201 aaKnown RBP15.86■□□□□ 0.13
USP39-201ENST00000323701 ZNF260Q3ZCT1 412 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 MOB3CQ70IA8 216 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 OR4D10Q8NGI6 311 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 GPX8Q8TED1 209 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 SPSB1Q96BD6 273 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 CCDC120Q96HB5 630 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 RGS13O14921 159 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 TPPPO94811 219 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 IL2RAP01589 272 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 GLI4P10075 376 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 SERPINA2P20848 420 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 TIMP3P35625 211 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 ALDH3B1P43353 468 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 TMEM50BP56557 158 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 IGFBP7Q16270 282 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 PLAC9Q5JTB6 97 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 PLCXD3Q63HM9 321 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 SFRP4Q6FHJ7 346 aaPredicted RBP15.86■□□□□ 0.13
USP39-201ENST00000323701 MRPL21Q7Z2W9 205 aaKnown RBP15.86■□□□□ 0.13
USP39-201ENST00000323701 KCNG3Q8TAE7 436 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 AQP3Q92482 292 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 DMRTB1Q96MA1 342 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 MARVELD1Q9BSK0 173 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 SELENOIQ9C0D9 397 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 KCNK7Q9Y2U2 307 aa15.86■□□□□ 0.13
USP39-201ENST00000323701 IGKV1-12A0A0C4DH73 117 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 METTL21EPA6NDL7 271 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 IGKV1D-12P01611 117 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 IL32P24001 234 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 CEACAM8P31997 349 aaPredicted RBP15.85■□□□□ 0.13
USP39-201ENST00000323701 CAPZA1P52907 286 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 UCNP55089 124 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 DYRK1AQ13627 763 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 OR2W3Q7Z3T1 314 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 PNLDC1Q8NA58 520 aaKnown RBP15.85■□□□□ 0.13
USP39-201ENST00000323701 CHST4Q8NCG5 386 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 BOD1Q96IK1 185 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 TMEM59Q9BXS4 323 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 ZNF581Q9P0T4 197 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 ID4P47928 161 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 RBP2P50120 134 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 MALLQ13021 153 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 PCGF3Q3KNV8 242 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 CDNFQ49AH0 187 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 Q6ZTK2 550 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 CALHM1Q8IU99 346 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 OR10R2Q8NGX6 335 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 HPSE2Q8WWQ2 592 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 PAPOLGQ9BWT3 736 aaKnown RBP15.85■□□□□ 0.13
USP39-201ENST00000323701 KCNN3Q9UGI6 736 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 SH3BGRL2Q9UJC5 107 aa15.85■□□□□ 0.13
USP39-201ENST00000323701 TRAV6A0A075B6T7 132 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 RBBP9O75884 186 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 IGKV3-15P01624 115 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 TMEM225BP0DP42 221 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 MGMTP16455 207 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 PTGER4P35408 488 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 CNN3Q15417 329 aaKnown RBP15.84■□□□□ 0.13
USP39-201ENST00000323701 TBC1D28Q2M2D7 210 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 GFRALQ6UXV0 394 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 C15orf40Q8WUR7 153 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 NUDCD2Q8WVJ2 157 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 BORCS8Q96FH0 119 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 CACNG6Q9BXT2 260 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 ELL3Q9HB65 397 aaPredicted RBP15.84■□□□□ 0.13
USP39-201ENST00000323701 NUDT15Q9NV35 164 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms