RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MYO15AQ9UKN7 3530 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 MYO7BQ6PIF6 2116 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ZNF726A6NNF4 738 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ZNF705EA8MWA4 302 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 DHRS3O75911 302 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SNAPINO95295 136 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 NR2C1P13056 603 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ZNF708P17019 499 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 PRKACAP17612 351 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 BLVRBP30043 206 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 EIF1P41567 113 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 H3F3AP84243 136 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ACY1Q03154 408 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ENDOGQ14249 297 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 RSPO1Q2MKA7 263 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 GFOD2Q3B7J2 385 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 TMEM268Q5VZI3 342 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 RTL6Q6ICC9 239 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 RAB11FIP2Q7L804 512 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SPAG16Q8N0X2 631 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SLC22A8Q8TCC7 542 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 PP6455Q8WZ26 134 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 WNT2BQ93097 391 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SPACA9Q96E40 222 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 LIN37Q96GY3 246 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 PGAM5Q96HS1 289 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SHDQ96IW2 340 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 NECAB3Q96P71 396 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 SPSB2Q99619 263 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 METTL8Q9H825 291 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 DECR2Q9NUI1 292 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 RCC2Q9P258 522 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 STMND1H3BQB6 276 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 TLX3O43711 291 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 IFNA2P01563 188 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 HKR1P10072 659 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 MUC1P15941 1255 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 PVALBP20472 110 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 MSR1P21757 451 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 CPT2P23786 658 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 SFTPDP35247 375 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 RFC3P40938 356 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 ECI1P42126 302 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 NPBWR1P48145 328 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 HOXA1P49639 335 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 AFF3P51826 1226 aaKnown RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 SLC35A1P78382 337 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 RBM39Q14498 530 aaKnown RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 UBE2V2Q15819 145 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 TMEM176BQ3YBM2 270 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 CHRFAM7AQ494W8 412 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 RPL7L1Q6DKI1 246 aaKnown RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 EIF5AL1Q6IS14 154 aaKnown RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 TMEM200AQ86VY9 491 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 CCDC54Q8NEL0 328 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 OR5D18Q8NGL1 313 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 HAS2Q92819 552 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 MED12Q93074 2177 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 TMEM54Q969K7 222 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 NABP1Q96AH0 204 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 C10orf35Q96D05 121 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 RASL10BQ96S79 203 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 MICU1Q9BPX6 476 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 CNTNAP3Q9BZ76 1288 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 NELFAQ9H3P2 528 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 SAV1Q9H4B6 383 aaPredicted RBP7.63□□□□□ -1.19
CLK1-201ENST00000321356 RHOFQ9HBH0 211 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 TREM1Q9NP99 234 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 MTCH2Q9Y6C9 303 aa7.63□□□□□ -1.19
CLK1-201ENST00000321356 IGKV1D-8A0A087WSZ0 117 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 MSTNO14793 375 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 BCAT2O15382 392 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 LRP3O75074 770 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 SCRG1O75711 98 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 F12P00748 615 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 GAPDHP04406 335 aaKnown RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 CD5P06127 495 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CTSDP07339 412 aaPredicted RBP7.62□□□□□ -1.19
CLK1-201ENST00000321356 FCGR3AP08637 254 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 HOXB5P09067 269 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 FAHP16930 419 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 LPAR6P43657 344 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 SULT1A2P50226 295 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 CLDN17P56750 224 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 SHBQ15464 509 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 ZNF528Q3MIS6 628 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 BTNL8Q6UX41 500 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 GJC3Q8NFK1 279 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 DMBX1Q8NFW5 382 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 NPRL2Q8WTW4 380 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 MAFIPQ8WZ33 124 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 Q96M66 194 aa7.62□□□□□ -1.19
CLK1-201ENST00000321356 TMEM231Q9H6L2 316 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms