RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FBXO34Q9NWN3 711 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 TBX21Q9UL17 535 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 RNF115Q9Y4L5 304 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 A0A0B4J2E0 115 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 A0A1B0GX12 115 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF860A6NHJ4 632 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 C5orf67F2Z3F1 127 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 GALR2O43603 387 aaPredicted RBP5.9□□□□□ -1.46
ZNF540-201ENST00000316433 NKX2-2O95096 273 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 DUS4LO95620 317 aaKnown RBP5.9□□□□□ -1.46
ZNF540-201ENST00000316433 IGHMP01871 453 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 CTSBP07858 339 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 ZBTB25P24278 435 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 OR12D2P58182 307 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 TMEM183BQ1AE95 376 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 TMEM215Q68D42 235 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 FAM166AQ6J272 317 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 Q6ZVL8 140 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 RBM45Q8IUH3 476 aaKnown RBP5.9□□□□□ -1.46
ZNF540-201ENST00000316433 SLC26A10Q8NG04 563 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 OR10H4Q8NGA5 316 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 OR11L1Q8NGX0 322 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 GRHL3Q8TE85 626 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 ARRDC3Q96B67 414 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 REEP6Q96HR9 211 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 C4orf36Q96KX1 117 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 GFI1Q99684 422 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 ABHD14AQ9BUJ0 271 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 SLC46A2Q9BY10 475 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 NMES1Q9C002 83 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 OR11A1Q9GZK7 315 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 MEGF9Q9H1U4 602 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 SMDT1Q9H4I9 107 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 SYNPO2LQ9H987 977 aa5.9□□□□□ -1.46
ZNF540-201ENST00000316433 HINT3Q9NQE9 182 aaKnown RBP5.9□□□□□ -1.46
ZNF540-201ENST00000316433 IGKV1-8A0A0C4DH67 115 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 C13orf42A0A1B0GVH6 325 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 A0A1B0GW64 132 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 J3QLW9 94 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF19P17023 458 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 FUT3P21217 361 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 VIPR2P41587 438 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 METAP1P53582 386 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 HIST1H3AP68431 136 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 CYCSP99999 105 aaKnown RBP5.9□□□□□ -1.47
ZNF540-201ENST00000316433 RBPJQ06330 500 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 P2RY6Q15077 328 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 PHF19Q5T6S3 580 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 RPUSD3Q6P087 351 aaKnown RBP5.9□□□□□ -1.47
ZNF540-201ENST00000316433 PRSS54Q6PEW0 395 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 C9orf40Q8IXQ3 194 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 CLEC1AQ8NC01 280 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 OR2A1Q8NGT9 310 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 FLVCR1-AS1Q8TAF5 88 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM239Q8WW34 195 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 DYRK2Q92630 601 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 SDSLQ96GA7 329 aa5.9□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM131Q92545 1883 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 CCDC88CQ9P219 2028 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 TRBV24-1A0A075B6N3 115 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 MEIS3P1A6NDR6 274 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 VSTM2BA6NLU5 285 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 OR4C45A6NMZ5 311 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 CEACAM18A8MTB9 384 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 FTCDNL1E5RQL4 147 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 H0YL77 283 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 EIF1AYO14602 144 aaKnown RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 ZIC2O95409 532 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM225BP0DP42 221 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 LYL1P12980 280 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 MDKP21741 143 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 BMP5P22003 454 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 EIF1AXP47813 144 aaKnown RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 RND2P52198 227 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 S100A10P60903 97 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 GUCA2AQ02747 115 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 PIN1Q13526 163 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 PRSS8Q16651 343 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 SAMD13Q5VXD3 122 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF793Q6ZN11 406 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 TEX43Q6ZNM6 134 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 RFLNAQ6ZTI6 216 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 Q6ZVH6 145 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 MEX3DQ86XN8 651 aaKnown RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 D2HGDHQ8N465 521 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 RNF175Q8N4F7 328 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF433Q8N7K0 673 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-201ENST00000316433 OR52L1Q8NGH7 329 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 GPR119Q8TDV5 335 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 AUTS2Q8WXX7 1259 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 GPR146Q96CH1 333 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 TVP23CQ96ET8 276 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 CMKLR1Q99788 373 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 GPR174Q9BXC1 333 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 OR6C3Q9NZP0 311 aa5.89□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF319Q9P2F9 582 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms