RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 HES7Q9BYE0 225 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF581Q9P0T4 197 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 FREM1Q5H8C1 2179 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 PINLYPA6NC86 204 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 NUPL2O15504 423 aaKnown RBP10.1□□□□□ -0.79
PTPN2-201ENST00000309660 HPNP05981 417 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 GLI4P10075 376 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SPINK2P20155 84 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 CLDN15P56746 228 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 ZXDAP98168 799 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 C10orf128Q5T292 105 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 DYRK2Q92630 601 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 CHMP1AQ9HD42 196 aaPredicted RBP10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SLC2A8Q9NY64 477 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF107Q9UII5 783 aaPredicted RBP10.1□□□□□ -0.79
PTPN2-201ENST00000309660 KIF25Q9UIL4 384 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 FRYQ5TBA9 3013 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 A0A096LPE4 126 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 A0A1W2PPZ6 126 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 FAM166BA8MTA8 275 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 MPTX1A8MV57 137 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 MFNGO00587 321 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 TDGF1P13385 188 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SRD5A2P31213 254 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 THBS4P35443 961 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
PTPN2-201ENST00000309660 ARHGDIBP52566 201 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 HGFACQ04756 655 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SIGIRRQ6IA17 410 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 CHST5Q9GZS9 411 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 PPA2Q9H2U2 334 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 C5orf66Q9H5L9 145 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 CSAG2Q9Y5P2 127 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SFTPBP07988 381 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CCL1P22362 96 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 MPGP29372 298 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 MPLP40238 635 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 RRADP55042 308 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 S100A10P60903 97 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CDC6Q99741 560 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 FOXB1Q99853 325 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 MS4A7Q9GZW8 240 aaPredicted RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 PLA2G3Q9NZ20 509 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 B3GALNT1O75752 331 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 UBBP0CG47 229 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CCL2P13500 99 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CPT2P23786 658 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 ITGA3P26006 1051 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 FAM27BQ5VT28 67 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM65Q6PI78 240 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 HOGA1Q86XE5 327 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 OR6K3Q8NGY3 331 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 FGFBP3Q8TAT2 258 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 PIGCQ92535 297 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 BORCS8Q96FH0 119 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 FAAP24Q9BTP7 215 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 PECRQ9BY49 303 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 ZC4H2Q9NQZ6 224 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 FOXD3Q9UJU5 478 aaPredicted RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 TSPAN4O14817 238 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 DUS4LO95620 317 aaKnown RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CYC1P08574 325 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 ICAM2P13598 275 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 MRPS34P82930 218 aaKnown RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CLPPQ16740 277 aaPredicted RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM128Q5BJH2 165 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 RGS7BPQ6MZT1 257 aaPredicted RBP10.09□□□□□ -0.79
PTPN2-201ENST00000309660 LPCAT3Q6P1A2 487 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 SLC23A3Q6PIS1 610 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 CLEC18BQ6UXF7 455 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 OR13G1Q8NGZ3 307 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 OR1F12Q8NHA8 337 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
PTPN2-201ENST00000309660 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 OR6C65A6NJZ3 312 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 APOC1P02654 83 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 CELA3AP09093 270 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF239Q16600 458 aaKnown RBP10.08□□□□□ -0.8
PTPN2-201ENST00000309660 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 GGNQ86UU5 652 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 SLC38A6Q8IZM9 456 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 BHLHE23Q8NDY6 225 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 OR5M9Q8NGP3 310 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 HAS2Q92819 552 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 IER2Q9BTL4 223 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 STRADBQ9C0K7 418 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 DOCK10Q96BY6 2186 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 A0A0D9SG52 128 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 A0A0U1RQV5 110 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 LRRC3CA6NJW4 275 aa10.08□□□□□ -0.8
PTPN2-201ENST00000309660 PRF1P14222 555 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms