RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ABCA4P78363 2273 aa11.42□□□□□ -0.58
SLIRP-201ENST00000238688 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 TMEM272A0A1B0GTI8 110 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CIB4A0PJX0 185 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 H3BUI4 141 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 LYRM1O43325 122 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 TNFSF13O75888 250 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 HLA-HP01893 362 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 TMIGD3P0DMS9 266 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 NAT2P11245 290 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CBR1P16152 277 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 IGHV1-2P23083 117 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CDK2P24941 298 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CHRNB4P30926 498 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 OPRM1P35372 400 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 FAUP35544 74 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 PTH2RP49190 550 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ACTBP60709 375 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ACTG1P63261 375 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 TAB1Q15750 504 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 GABRA6Q16445 453 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 SNAI3Q3KNW1 292 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF585AQ6P3V2 769 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 MEX3BQ6ZN04 569 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 TOMM5Q8N4H5 51 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CNEP1R1Q8N9A8 125 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 OR52N4Q8NGI2 321 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ENKURQ8TC29 256 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 YIPF5Q969M3 257 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 FAM46BQ96A09 425 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 C14orf79Q96F83 325 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ABHD1Q96SE0 405 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 URM1Q9BTM9 101 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 OR10A4Q9H209 315 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 CNTD2Q9H8S5 307 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 NPAP1Q9NZP6 1156 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 EIF3KQ9UBQ5 218 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 Q9UFV3 132 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 SLC7A11Q9UPY5 501 aa11.41□□□□□ -0.58
SLIRP-201ENST00000238688 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
SLIRP-201ENST00000238688 HIVEP1P15822 2718 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 LOC100509620A0A075B734 347 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 A0A096LPE4 126 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 A0A1W2PPZ6 126 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 FAM90A27PA6NNH2 459 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 MSTNO14793 375 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 TPD52L2O43399 206 aaKnown RBP11.4□□□□□ -0.58
SLIRP-201ENST00000238688 CST4P01036 141 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 CGAP01215 116 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 SELEP16581 610 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 FUT6P51993 359 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 RAG2P55895 527 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 TAS2R20P59543 309 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 QRFPP83859 136 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 FAM3AP98173 230 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 KISS1Q15726 138 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 SFRP5Q5T4F7 317 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 AWAT2Q6E213 333 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-201ENST00000238688 SLC30A7Q8NEW0 376 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 STEAP2Q8NFT2 490 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 FGFBP3Q8TAT2 258 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 SLC7A6Q92536 515 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 ZNF75AQ96N20 296 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 S100A13Q99584 98 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 IL36GQ9NZH8 169 aa11.4□□□□□ -0.58
SLIRP-201ENST00000238688 MRPS28Q9Y2Q9 187 aaKnown RBP11.4□□□□□ -0.58
SLIRP-201ENST00000238688 A0A0B4J203 849 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 C5orf49A4QMS7 147 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 NRASP01111 189 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 IGKV3-15P01624 115 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CSF1P09603 554 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 FAHP16930 419 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF14P17017 642 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 PSMB1P20618 241 aaKnown RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 SSTR2P30874 369 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 PTGFRP43088 359 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 RBP2P50120 134 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 BCAP31P51572 246 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CLDN12P56749 244 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 HGFACQ04756 655 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 PPA1Q15181 289 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 GFOD2Q3B7J2 385 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF57Q68EA5 555 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 PLET1Q6UQ28 207 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CCBE1Q6UXH8 406 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 FBXW12Q6X9E4 464 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 GDPD3Q7L5L3 318 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 MRPL21Q7Z2W9 205 aaKnown RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 NAA40Q86UY6 237 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 ANGPTL5Q86XS5 388 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 GCNT2Q8N0V5 402 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 OR4D6Q8NGJ1 314 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CHAC2Q8WUX2 184 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CREB3L1Q96BA8 519 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 STARD4Q96DR4 205 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms