RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FABP5Q01469 135 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 UBE3DQ7Z6J8 389 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ZDHHC11BP0C7U3 371 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ACER2Q5QJU3 275 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 PRRX2Q99811 253 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 NTN4Q9HB63 628 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 PLEKHB1Q9UF11 243 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-201ENST00000225964 PSG11Q9UQ72 335 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 IL9P15248 144 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 LIMK1P53667 647 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 LYG2Q86SG7 212 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 PLEKHA2Q9HB19 425 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 MYO9BQ13459 2157 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 LALBAP00709 142 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF485Q8NCK3 441 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
COL1A1-201ENST00000225964 DOCK2Q92608 1830 aa11.87□□□□□ -0.51
COL1A1-201ENST00000225964 KRASP01116 189 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 TCTN1Q2MV58 587 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 FAM162BQ5T6X4 162 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 LHX8Q68G74 356 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ETFRF1Q6IPR1 90 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR10D3Q8NH80 312 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 AUNIPQ9H7T9 357 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 K7ESF4 209 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 SCGB1C2P0DMR2 95 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 G0S2P27469 103 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF117Q03924 483 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ACVR1Q04771 509 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 FUT7Q11130 342 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF260Q3ZCT1 412 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 C20orf196Q8IYI0 205 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR2G2Q8NGZ5 317 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 GON4LQ3T8J9 2241 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 Q7L0L9 218 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 SYS1Q8N2H4 156 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 PECRQ9BY49 303 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 PCED1AQ9H1Q7 454 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 FOXJ3Q9UPW0 622 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 TNFSF14O43557 240 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 LY86O95711 162 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 CD80P33681 288 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 RPP25Q9BUL9 199 aaKnown RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 SPNS1Q9H2V7 528 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 GPX5O75715 221 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 HRASP01112 189 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OPN1MWP04001 364 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OPN1MW2P0DN77 364 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OPN1MW3P0DN78 364 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 HSD17B10Q99714 261 aaKnown RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV1OR15-9A0A0B4J2B8 117 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV3-13P01766 116 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 IGHV3-7P01780 117 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-201ENST00000225964 PDZK1IP1Q13113 114 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
COL1A1-201ENST00000225964 Q3ZCU0 254 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 DGAT2L6Q6ZPD8 337 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 OR5D13Q8NGL4 314 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 CNRIP1Q96F85 164 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 DOK1Q99704 481 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF230Q9UIE0 474 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 KCNE3Q9Y6H6 103 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 CDX2Q99626 313 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-201ENST00000225964 CXXC4Q9H2H0 198 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 BCL2L10Q9HD36 194 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 DOK5Q9P104 306 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 FGF2P09038 288 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 FAM3AP98173 230 aa11.85□□□□□ -0.51
COL1A1-201ENST00000225964 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms