RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SULT1A1P50225 295 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 EMC4Q5J8M3 183 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ZNF511Q8NB15 262 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SLC38A9Q8NBW4 561 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 YIPF5Q969M3 257 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 MRGPRX4Q96LA9 322 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SPOCK3Q9BQ16 436 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 CHST6Q9GZX3 395 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 LYRM4Q9HD34 91 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 USP54Q70EL1 1684 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ZNF195O14628 629 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 INHBBP09529 407 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 HLA-BQ31612 363 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 LRRC55Q6ZSA7 311 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 DCXRQ7Z4W1 244 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 FOXN4Q96NZ1 517 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PLEKHB1Q9UF11 243 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 TBX10O75333 385 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PRDX1Q06830 199 aaKnown RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 INPP5JQ15735 1006 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 AGBL4Q5VU57 503 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 DCAF12L2Q5VW00 463 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TMEM236Q5W0B7 351 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 UMODL1-AS1Q8N2C9 162 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 CLDN23Q96B33 292 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TMEM167BQ9NRX6 74 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 WDR1O75083 606 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PARP16Q8N5Y8 322 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 CYB561A3Q8NBI2 242 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ZNF740Q8NDX6 193 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SNRNP40Q96DI7 357 aaKnown RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 NTN4Q9HB63 628 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 RAXQ9Y2V3 346 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 LOC285095A0A1B0GVY8 99 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 C1orf105O95561 183 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 RPEL1Q2QD12 228 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PROX2Q3B8N5 592 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TMEM52BQ4KMG9 183 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 OR10Z1Q8NGY1 313 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ETV7Q9Y603 341 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 MELTFP08582 738 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 FAM157CP0CG43 387 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 RSPO4Q2I0M5 234 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 PCSK4Q6UW60 755 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 LINC00346Q8IVM7 164 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 CDX2Q99626 313 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 MN1Q10571 1320 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 MYH4Q9Y623 1939 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PLIN4Q96Q06 1357 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 FRG2CA6NGY1 282 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ARPC1BO15143 372 aaKnown RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 FZD6O60353 706 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 RD3LP0DJH9 198 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 HTR1FP30939 366 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PTGFRP43088 359 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ASCL1P50553 236 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TEX261Q6UWH6 196 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PDPNQ86YL7 162 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PNPLA1Q8N8W4 532 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 OPALINQ96PE5 141 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 THAP10Q9P2Z0 257 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 MIOXQ9UGB7 285 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ING1Q9UK53 422 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 ANKRD36CQ5JPF3 1778 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TRAV27A0A087WT01 109 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 IGKV3D-11A0A0A0MRZ8 115 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 IGKV3-11P04433 115 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 HKR1P10072 659 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SNRPD3P62318 126 aaKnown RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 RPS26P62854 115 aaKnown RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 RAB40BQ12829 278 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 TMEM78Q5T7P6 136 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SEZ6L2Q6UXD5 910 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 EID2BQ96D98 161 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SLC25A18Q9H1K4 315 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 MBD5Q9P267 1494 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 CLDN18P56856 261 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 GNG3P63215 75 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 DEFB103AP81534 67 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SLC16A13Q7RTY0 426 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 BAHD1Q8TBE0 780 aaPredicted RBP3.11□□□□□ -1.91
NEB-201ENST00000172853 LAT2Q9GZY6 243 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 DOK5Q9P104 306 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ZNF154Q13106 437 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 LRRC75BQ2VPJ9 315 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 OR8J2Q8NGG1 315 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 OR10C1Q96KK4 312 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 KREMEN1Q96MU8 473 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 C12orf57Q99622 126 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 FER1L6Q2WGJ9 1857 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 PNPP00491 289 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 ACOT7LQ6ZUV0 252 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 SCD5Q86SK9 330 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 RDH5Q92781 318 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 FAM210BQ96KR6 192 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 NMNAT3Q96T66 252 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 GABARAPL3Q9BY60 117 aa3.11□□□□□ -1.91
NEB-201ENST00000172853 MARCH4Q9P2E8 410 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms