RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Supt7lQ9CZV5 412 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mrpl28Q9D1B9 257 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Cmtm2aQ9DAR1 169 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 HikeshiQ9DD02 197 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Paqr4Q9JJE4 273 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Klrc3Q9QXN7 221 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Rnaset2aC0HKG5 259 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Rnaset2bC0HKG6 259 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr557E9Q550 322 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm10269G3UWD7 123 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm10428J3QNV7 132 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Vmn1r122K7N726 305 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm4778L7N229 365 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Grcc10O35127 126 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ccl20O89093 97 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Tacr3P47937 452 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Rpl27P61358 136 aaKnown RBP12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Tmem217Q14AF1 189 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Fahd2Q3TC72 313 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Scarb1Q61009 509 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Doxl2Q6IMK7 723 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr1173Q7TR24 312 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Paqr7Q80ZE4 345 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 H2-M10.5Q85ZW7 330 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Dcun1d4Q8CCA0 292 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Vmn1r35Q8R2E2 296 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr995Q8VF74 315 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr1423Q8VFV0 310 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 PccbQ99MN9 541 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Tomm20Q9DCC8 145 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Psma1Q9R1P4 263 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ppp1r17Q9Z2E4 159 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Unc119Q9Z2R6 240 aa12.02□□□□□ -0.49
Nup88-201ENSMUST00000035283 Npffr1E9Q468 432 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ascl4M0QW46 144 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gfi1bO70237 330 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ccl22O88430 92 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gstm3P19639 218 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Casp3P70677 277 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Fam196aQ3USH1 422 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Cbx5Q61686 191 aaKnown RBP12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 BckdhbQ6P3A8 390 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 EnkurQ6SP97 255 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr1148Q7TR35 314 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Abhd13Q80UX8 337 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 2610318N02RikQ80VT5 305 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Oxa1lQ8BGA9 433 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Rspry1Q8BVR6 576 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Rbm48Q8K2X2 371 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gtf2f2Q8R0A0 249 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Q8R3Y5 413 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr732Q8VFT5 308 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Cacng5Q8VHW4 275 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Q91WE4 72 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Acy3Q91XE4 318 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Tex12Q9CR81 123 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Mrpl14Q9D1I6 145 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Nkain4Q9JMG4 208 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr1018A2ASV3 311 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Zfp648D3Z0W3 525 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm21761J3QK00 171 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Zfp955bL7N232 545 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 H2-Ab1P01921 265 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 P06344 263 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 HbzP06467 142 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Irf1P15314 329 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Hmx3P42581 356 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Rnf133Q14B02 382 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Trim63Q38HM4 350 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 TrmoQ562D6 431 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Slc22a18Q78KK3 406 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 CslQ80X68 466 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Slc25a44Q8BGF9 314 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Vmn1r189Q8K3N3 312 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Neil1Q8K4Q6 389 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Vmn1r229Q8R2A9 306 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr794Q8VF26 320 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr401Q8VFX6 315 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Pla1aQ8VI78 456 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Tmem123Q91Z22 195 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr661Q99NH4 319 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 SdhdQ9CXV1 159 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Eef1akmt1Q9CY45 214 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Fgf16Q9ESL8 207 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Mrps34Q9JIK9 218 aa12.01□□□□□ -0.49
Nup88-201ENSMUST00000035283 Loxhd1C8YR32 2068 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm21117A0A087WPJ9 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm20820A0A087WPP3 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm20937A0A087WQA3 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm21258A0A087WQC7 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm21095A0A087WR14 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm20824A0A087WS97 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm29866A0A0A6YX04 222 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm35315A0A1B0GRI2 571 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm10439A2AJU2 433 aaKnown RBP12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Skint8A7XV07 398 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm15114B1B0X6 433 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Ly6g6fB2RXM6 300 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Gm5901D3YVJ1 333 aa12□□□□□ -0.49
Nup88-201ENSMUST00000035283 Olfr608E9Q564 316 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms