RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-255	ENST00000641733	PRELID1	Q9Y255	219 aa		4.87	□□□□□ -1.63
CASC19-255	ENST00000641733	ACOT9	Q9Y305	439 aa		4.87	□□□□□ -1.63
CASC19-255	ENST00000641733	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733		A0A1W2PRG6	482 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RBMY1B	A6NDE4	496 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RBMY1E	A6NEQ0	496 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	HIDE1	A8MVS5	230 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ACOT8	O14734	319 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC16A4	O15374	487 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	CRX	O43186	299 aa	Predicted RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	DPM1	O60762	260 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RBMY1D	P0C7P1	496 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RBMY1A1	P0DJD3	496 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	GNB3	P16520	340 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	F2R	P25116	425 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	HLA-DMA	P28067	261 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	HMGCL	P35914	325 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	GPX4	P36969	197 aa	Predicted RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	MAGEA3	P43357	314 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	TGM4	P49221	684 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	VBP1	P61758	197 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	HMGCS1	Q01581	520 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	SEMG2	Q02383	582 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	C2orf54	Q08AI8	447 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	DYNC1I2	Q13409	638 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	LPAL2	Q16609	132 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	TMEM249	Q2WGJ8	235 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF506	Q5JVG8	444 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF677	Q86XU0	584 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	LRRC34	Q8IZ02	419 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	LFNG	Q8NES3	379 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	SPATA3	Q8NHX4	192 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	CCDC26	Q8TAB7	109 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	AGAP11	Q8TF27	550 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RNF133	Q8WVZ7	376 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	TMEM190	Q8WZ59	177 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ARPC1A	Q92747	370 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	LYZL4	Q96KX0	146 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	OR5M11	Q96RB7	305 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	P2RX4	Q99571	388 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ZBP1	Q9H171	429 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF442	Q9H7R0	627 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ISYNA1	Q9NPH2	558 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ABCB10	Q9NRK6	738 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.86	□□□□□ -1.63
CASC19-255	ENST00000641733		Q9UF83	564 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	CYB5R1	Q9UHQ9	305 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	RAB23	Q9ULC3	237 aa		4.86	□□□□□ -1.63
CASC19-255	ENST00000641733	ABCB11	O95342	1321 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	SMG1	Q96Q15	3661 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	BPTF	Q12830	3046 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	IGHV3OR16-13	A0A075B7E8	117 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF593	O00488	134 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	AGPAT2	O15120	278 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	TBL1X	O60907	577 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	RBBP9	O75884	186 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	LAMP1	P11279	417 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	LOX	P28300	417 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	RPL34	P49207	117 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	RPL14	P50914	215 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF121	P58317	390 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	RPL18A	Q02543	176 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	COX19	Q49B96	90 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	NAXD	Q8IW45	347 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	PGAM4	Q8N0Y7	254 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	C4orf32	Q8N8J7	132 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	OR4F15	Q8NGB8	312 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	SFXN5	Q8TD22	340 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	ADTRP	Q96IZ2	230 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC45A3	Q96JT2	553 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	VAT1	Q99536	393 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	CHRNA10	Q9GZZ6	450 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	TMEM9B	Q9NQ34	198 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	IFT46	Q9NQC8	304 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	PLEKHJ1	Q9NW61	149 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC25A37	Q9NYZ2	338 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	MYH7B	A7E2Y1	1941 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	KIAA1671	Q9BY89	1806 aa		4.85	□□□□□ -1.63
CASC19-255	ENST00000641733	PLXNA4	Q9HCM2	1894 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	TRAV9-2	A0A087WT02	112 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ANKRD65	E5RJM6	399 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC16A7	O60669	478 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ADAP1	O75689	374 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	UTS2	O95399	124 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	SEMA4F	O95754	770 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	RAB36	O95755	333 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	AIFM1	O95831	613 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ORM1	P02763	201 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ALPL	P05186	524 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	HPN	P05981	417 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	HOXC4	P09017	264 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	ZNF286B	P0CG31	522 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	SLC35E2	P0CK97	266 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	LIPC	P11150	499 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	MLN	P12872	115 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	IGLL1	P15814	213 aa		4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	TCP1	P17987	556 aa	Known RBP	4.84	□□□□□ -1.63
CASC19-255	ENST00000641733	GGT1	P19440	569 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms