RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 HSPB6O14558 160 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 ICAM2P13598 275 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 MAGT1Q9H0U3 335 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.31
VPS36-207ENST00000611132 HTD2P86397 168 aa13.08□□□□□ -0.31
VPS36-207ENST00000611132 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.31
VPS36-207ENST00000611132 RAB33BQ9H082 229 aa13.08□□□□□ -0.31
VPS36-207ENST00000611132 FGF21Q9NSA1 209 aa13.08□□□□□ -0.31
VPS36-207ENST00000611132 AMDHD2Q9Y303 409 aa13.08□□□□□ -0.31
VPS36-207ENST00000611132 LINC01553A4QN01 128 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 PAX6P26367 422 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 WNT2BQ93097 391 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
VPS36-207ENST00000611132 IGHV3-20A0A0C4DH32 117 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 M0R135 149 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 MPZL1O95297 269 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 ECH1Q13011 328 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 ZNF799Q96GE5 643 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 KCNAB3O43448 404 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 EIF1BO60739 113 aaKnown RBP13.08□□□□□ -0.32
VPS36-207ENST00000611132 CLDN1O95832 211 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 SULT1A1P50225 295 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 THNSL2Q86YJ6 484 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
VPS36-207ENST00000611132 SEC14L6B5MCN3 397 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 FAM157BP0CG42 384 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 CATSPERDQ86XM0 798 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 KLK13Q9UKR3 277 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 A0A1W2PNR3 127 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 GUSBP08236 651 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
VPS36-207ENST00000611132 CD226Q15762 336 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 ZNF787Q6DD87 383 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 ZNF100Q8IYN0 542 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 LIPHQ8WWY8 451 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 KIR2DS1A0A191URI9 304 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 ANKRD30BLA7E2S9 258 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 CYR61O00622 381 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 HSD17B6O14756 317 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 CDC14BO60729 498 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 FGF7P21781 194 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 KIR2DS4P43632 304 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 GAS1P54826 345 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 KIR2DS1Q14954 304 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 PLEKHF2Q9H8W4 249 aa13.07□□□□□ -0.32
VPS36-207ENST00000611132 MED19A0JLT2 244 aaPredicted RBP13.06□□□□□ -0.32
VPS36-207ENST00000611132 THY1P04216 161 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 FAHP16930 419 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
VPS36-207ENST00000611132 PP6455Q8WZ26 134 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 NTNG2Q96CW9 530 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 PLEKHA3Q9HB20 300 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 ANKRD36A6QL64 1941 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 CCDC187A0A096LP49 1063 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
VPS36-207ENST00000611132 UPK3AO75631 287 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 CST7O76096 145 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 ZBTB25P24278 435 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 DHODHQ02127 395 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 RAB31Q13636 194 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 C1QL3Q5VWW1 255 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 AAED1Q7RTV5 226 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 TMEM18Q96B42 140 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 TMEM100Q9NV29 134 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 MT-CO2P00403 227 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 CFIP05156 583 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 SLC37A1P57057 533 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 KISS1Q15726 138 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 IL22RA1Q8N6P7 574 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 TMEM104Q8NE00 496 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 OR51H1Q8NH63 302 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 SMIM7Q9BQ49 75 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 A0A1B0GX78 115 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 GATCO43716 136 aaKnown RBP13.06□□□□□ -0.32
VPS36-207ENST00000611132 CD79AP11912 226 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 SSTP61278 116 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 MICBQ29980 383 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 NECAP1Q8NC96 275 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 LHX4Q969G2 390 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 PTX4Q96A99 478 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 OR14J1Q9UGF5 321 aa13.06□□□□□ -0.32
VPS36-207ENST00000611132 SBF1O95248 1867 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
VPS36-207ENST00000611132 PEBP1P30086 187 aaKnown RBP13.05□□□□□ -0.32
VPS36-207ENST00000611132 OR3A4PP47883 348 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms