RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FCGR3BO75015 233 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SERPINB7O75635 380 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 LYZL6O75951 148 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 MFN2O95140 757 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 AKR7A3O95154 331 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 AHSA1O95433 338 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 LGI1O95970 557 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGF2P01344 180 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 VIMP08670 466 aaKnown RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 GKN3PP0CG01 181 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRG2P13727 222 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 NCF2P19878 526 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 GATA2P23769 480 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 GZMMP51124 257 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SH3BGRP55822 239 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPS4XP62701 263 aaKnown RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TGFBR3Q03167 851 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 BSPH1Q075Z2 132 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CEACAM7Q14002 265 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SCARB2Q14108 478 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CAPRIN1Q14444 709 aaKnown RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TSC22D1Q15714 1073 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 STK11Q15831 433 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 NRF1Q16656 503 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 AGKQ53H12 422 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TSPO2Q5TGU0 170 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 C1orf140Q5VVS0 124 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM225Q6GV28 225 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF544Q6NX49 715 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 DHRS11Q6UWP2 260 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 NHLRC1Q6VVB1 395 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM182Q6ZP80 229 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 DNM1P46Q6ZS02 220 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CCDC80Q76M96 950 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 C5orf24Q7Z6I8 188 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 HMGN2P46Q86SG4 172 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CROCCP3Q8IVE0 287 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CCDC36Q8IYA8 594 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 LYG1Q8N1E2 194 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 C10orf111Q8N326 155 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 Q8N377 158 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CADM2Q8N3J6 435 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 WDR31Q8NA23 367 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR10G7Q8NGN6 311 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 MAGEE2Q8TD90 523 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 DYDC1Q8WWB3 177 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 RASSF5Q8WWW0 418 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 MAL2Q969L2 176 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 OXGR1Q96P68 337 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF607Q96SK3 696 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 CGREF1Q99674 301 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SH3GL1Q99961 368 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SOSTQ9BQB4 213 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 ALKBH7Q9BT30 221 aaPredicted RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM43Q9BTV4 400 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF426Q9BUY5 554 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TAPBPLQ9BX59 468 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 PARLQ9H300 379 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 IKZF5Q9H5V7 419 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 KAT8Q9H7Z6 458 aaKnown RBP2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC17A5Q9NRA2 495 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC7A10Q9NS82 523 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 FAIMQ9NVQ4 179 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SMAD5-AS1Q9Y6J3 95 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 TANC2Q9HCD6 1990 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGKV1D-42A0A075B6H8 117 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRAV36DV7A0A075B6V5 113 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV4-30-2A0A087WSY4 118 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 hCG_38984A0A1B0GV85 526 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A1B0GWA3 101 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CIB4A0PJX0 185 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 NKX6-3A6NJ46 265 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CCT8L1PA6NM43 557 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 BBIP1A8MTZ0 92 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 A8MXK9 166 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 H7C417 338 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 M0QX08 132 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 FXYD1O00168 92 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 FBP2O00757 339 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ABCD4O14678 606 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 AIM2O14862 343 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ANGPT2O15123 496 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ATP8B1O43520 1251 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRAF3IP2O43734 574 aaPredicted RBP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CHP2O43745 196 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MGRN1O60291 552 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TPST1O60507 370 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TPST2O60704 377 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAD51DO75771 328 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 PDE5AO76074 875 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 NXPH4O95158 308 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 MT-ATP6P00846 226 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGKV3-15P01624 115 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CD8AP01732 235 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 SOD3P08294 240 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 TROVE2P10155 538 aaKnown RBP eCLIP2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ACADSP16219 412 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF43P17038 809 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 CCNA2P20248 432 aa2.89□□□□□ -1.95
CKS1BP3-201ENST00000600888 HTR2AP28223 471 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms