RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DMRTA2Q96SC8 542 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 ABHD1Q96SE0 405 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 GPER1Q99527 375 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 C1QTNF6Q9BXI9 259 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 ELOVL5Q9NYP7 299 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 KCNN3Q9UGI6 736 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 SVILO95425 2214 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 GGT3PA6NGU5 568 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 PRSS12P56730 875 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 PNLDC1Q8NA58 520 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 CSNK2A3Q8NEV1 391 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 STEAP2Q8NFT2 490 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 OR6F1Q8NGZ6 308 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 C15orf40Q8WUR7 153 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 PIGTQ969N2 578 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 CPNE2Q96FN4 548 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 SPACA5Q96QH8 159 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 USB1Q9BQ65 265 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 DIABLOQ9NR28 239 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 RAB22AQ9UL26 194 aa15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 MRPS7Q9Y2R9 242 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-224ENST00000600718 TRGV8A0A0C4DH27 118 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 RAB6AP20340 208 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 MNDAP41218 407 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 EFNB2P52799 333 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 SCN1BQ07699 218 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 PLA2G7Q13093 441 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 HLXQ14774 488 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 RFPL4BQ6ZWI9 263 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 PIGCQ92535 297 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 S100PBPQ96BU1 408 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 POFUT1Q9H488 388 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 JKAMPQ9P055 326 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 FBLN5Q9UBX5 448 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 MRPS28Q9Y2Q9 187 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 MEMO1Q9Y316 297 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 CACNA1AO00555 2505 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 CTDSPLO15194 276 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 XRCC3O43542 346 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 UBBP0CG47 229 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 CDK2P24941 298 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 CA7P43166 264 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 C3orf36Q3SXR2 165 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 AWAT2Q6E213 333 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 UNQ6126/PRO20091Q6UXV3 157 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 RNF144BQ7Z419 303 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 FTMTQ8N4E7 242 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 OR56B2PQ8NGI1 322 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 SETD6Q8TBK2 473 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 UBASH3BQ8TF42 649 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 NPRL2Q8WTW4 380 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 PHF21AQ96BD5 680 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 MUCL1Q96DR8 90 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 WBP1Q96G27 269 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 GHRLQ9UBU3 117 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 SLC7A11Q9UPY5 501 aa15.22■□□□□ 0.03
SHKBP1-224ENST00000600718 NCOR2Q9Y618 2525 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 SMPD2O60906 423 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 CTAG2O75638 210 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 CST4P01036 141 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 ZNF35P13682 527 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 PTGFRP43088 359 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 MMP15P51511 669 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 UCP2P55851 309 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 PPP1CBP62140 327 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 QRFPP83859 136 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 TMEM69Q5SWH9 247 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 TRIQKQ629K1 86 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 GLIPR1L1Q6UWM5 242 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 MOB3CQ70IA8 216 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 CELF2-AS1Q8N7Q2 184 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 ATG5Q9H1Y0 275 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 KCNK15Q9H427 330 aa15.21■□□□□ 0.03
SHKBP1-224ENST00000600718 A0A1W2PQ09 198 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 CD300LBA8K4G0 201 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 HLA-DQB1P01920 261 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 CECR9P0C854 216 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 TUBG1P23258 451 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ALDH3B1P43353 468 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 OR3A4PP47883 348 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 FUT6P51993 359 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 MTCP1P56278 107 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 FAM27E3Q08E93 113 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 DMRTC1Q5HYR2 192 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ATAD3CQ5T2N8 411 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 FBXW12Q6X9E4 464 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 LHFPL2Q6ZUX7 228 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 OR2W3Q7Z3T1 314 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 IZUMO1Q8IYV9 350 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ASCC1Q8N9N2 400 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 C19orf18Q8NEA5 215 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 THAP7Q9BT49 309 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 OR51B6Q9H340 312 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 TUBG2Q9NRH3 451 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 ATMQ13315 3056 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 RTTNQ86VV8 2226 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 A0A0A6YYH2 397 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 IGHV1-18A0A0C4DH31 117 aa15.2■□□□□ 0.02
SHKBP1-224ENST00000600718 A6NJ64 397 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms