RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
HDAC5-203ENST00000586339 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
HDAC5-203ENST00000586339 MED20Q9H944 212 aa11.61□□□□□ -0.55
HDAC5-203ENST00000586339 C1RLQ9NZP8 487 aa11.61□□□□□ -0.55
HDAC5-203ENST00000586339 DNAJC27Q9NZQ0 273 aa11.61□□□□□ -0.55
HDAC5-203ENST00000586339 IGHV3OR15-7A0A075B7D8 119 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 PRR23D1E9PI22 279 aaPredicted RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 PRODHO43272 600 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 FKBP6O75344 327 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 PRR23D2P0DMB1 279 aaPredicted RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 PSMA6P60900 246 aaKnown RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 BNIP1Q12981 228 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 GFOD2Q3B7J2 385 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 STUMQ69YW2 141 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 CMTM4Q8IZR5 234 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 NPRL2Q8WTW4 380 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 LRTOMTQ8WZ04 291 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 ITFG2Q969R8 447 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 OTULINQ96BN8 352 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 AMELYQ99218 206 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 OR51V1Q9H2C8 321 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 PDP1Q9P0J1 537 aaPredicted RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 ZNF319Q9P2F9 582 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 CAB39Q9Y376 341 aaPredicted RBP11.6□□□□□ -0.55
HDAC5-203ENST00000586339 RHBDD3Q9Y3P4 386 aa11.6□□□□□ -0.55
HDAC5-203ENST00000586339 CLPSL1A2RUU4 121 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 GNGT2O14610 69 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 CDIPTO14735 213 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 NDUFB3O43676 98 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 CST4P01036 141 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 HMGN1P05114 100 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 PRKACGP22612 351 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 CBX1P83916 185 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 RELBQ01201 579 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 FAM76BQ5HYJ3 339 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 SLC35D3Q5M8T2 416 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 VMO1Q7Z5L0 202 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.59□□□□□ -0.55
HDAC5-203ENST00000586339 PAPD5Q8NDF8 572 aaKnown RBP11.59□□□□□ -0.55
HDAC5-203ENST00000586339 CCL13Q99616 98 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 DPAGT1Q9H3H5 408 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 BRD7Q9NPI1 651 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 TNFRSF19Q9NS68 423 aa11.59□□□□□ -0.55
HDAC5-203ENST00000586339 A0A0U1RQK1 487 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 KCNAB3O43448 404 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 ACKR3P25106 362 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 IER3P46695 156 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 TGM4P49221 684 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 POU4F2Q12837 409 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 PRDX4Q13162 271 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 PLBD1Q6P4A8 553 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 GDPGP1Q6ZNW5 385 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 KRT74Q7RTS7 529 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 RAB3IPQ96QF0 476 aaPredicted RBP11.58□□□□□ -0.56
HDAC5-203ENST00000586339 CITED1Q99966 193 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 DCTN5Q9BTE1 182 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 HAO2Q9NYQ3 351 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 ONECUT1Q9UBC0 465 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 DNAJB11Q9UBS4 358 aa11.58□□□□□ -0.56
HDAC5-203ENST00000586339 DSCAML1Q8TD84 2053 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 A0A1B0GW55 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 GPR137BO60478 399 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 SELENOFO60613 162 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 E2F6O75461 281 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 IGHV4-59P01825 116 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 FBP1P09467 338 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L2P0CJ85 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L3P0CJ86 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L4P0CJ87 422 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L5P0CJ88 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L6P0CJ89 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L7P0CJ90 424 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 OSMP13725 252 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 POU1F1P28069 291 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 CDK5Q00535 292 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 GINS1Q14691 196 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4L9Q6RFH8 374 aaPredicted RBP11.57□□□□□ -0.56
HDAC5-203ENST00000586339 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 ZDHHC23Q8IYP9 409 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 FGFRL1Q8N441 504 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 THEM6Q8WUY1 208 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 MED30Q96HR3 178 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 PKP2Q99959 881 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 TEX12Q9BXU0 123 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 PPP1R3EQ9H7J1 279 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
HDAC5-203ENST00000586339 DUX4Q9UBX2 424 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms