RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	ZNF584	Q8IVC4	421 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	BEND2	Q8NDZ0	799 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	AKR1E2	Q96JD6	320 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	CCNL2	Q96S94	520 aa	Predicted RBP	10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	SLC26A1	Q9H2B4	701 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	OR2S2	Q9NQN1	319 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	ZNF107	Q9UII5	783 aa	Predicted RBP	10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	TIMM10B	Q9Y5J6	103 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820	KPTN	Q9Y664	436 aa		10.64	□□□□□ -0.71
SPG7-222	ENST00000569820		A0A1W2PPH5	198 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ALG1L2	C9J202	215 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ARPC3	O15145	178 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	NME2	P22392	152 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ACKR3	P25106	362 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	CCKBR	P32239	447 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	SERPINF1	P36955	418 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	LPAR6	P43657	344 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	IL11RA	Q14626	422 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	CLEC9A	Q6UXN8	241 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	CCDC54	Q8NEL0	328 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	OR4S1	Q8NGB4	309 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ROBO4	Q8WZ75	1007 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ISOC2	Q96AB3	205 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	KIRREL1	Q96J84	757 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	CDC6	Q99741	560 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	NKX3-1	Q99801	234 aa	Predicted RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ZMAT3	Q9HA38	289 aa	Known RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	SIRT7	Q9NRC8	400 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	SLC2A8	Q9NY64	477 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	TMED7	Q9Y3B3	224 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	GOLT1B	Q9Y3E0	138 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	hCG_1809904	A0A1W2PP81	198 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820		A0A1W2PR64	198 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820		A0A1W2PRV1	198 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820		C9JQL5	133 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ADAM10	O14672	748 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	FBXO24	O75426	580 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	SNRNP70	P08621	437 aa	Known RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	PNMT	P11086	282 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	EMP2	P54851	167 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	OR2B8P	P59922	312 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	LSM6	P62312	80 aa	Known RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	RAP1A	P62834	184 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	GAGE1	Q13065	139 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	HMGN3	Q15651	99 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	MRPL14	Q6P1L8	145 aa	Known RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	MARCH3	Q86UD3	253 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	C1QL4	Q86Z23	238 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	PRSS35	Q8N3Z0	413 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ZDHHC22	Q8N966	263 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	PLPP7	Q8NBV4	271 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	AGBL5	Q8NDL9	886 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	THRSP	Q92748	146 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	BSCL2	Q96G97	398 aa	Predicted RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	TSSK2	Q96PF2	358 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	RNF126	Q9BV68	326 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	NMES1	Q9C002	83 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	ARRDC1-AS1	Q9H2J1	176 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	KLK13	Q9UKR3	277 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	GAB2	Q9UQC2	676 aa		10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.63	□□□□□ -0.71
SPG7-222	ENST00000569820	KIF26B	Q2KJY2	2108 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	PCNX3	Q9H6A9	2034 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	KMT2E	Q8IZD2	1858 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	CPAMD8	Q8IZJ3	1885 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	FAM157A	C9JC47	383 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	ZNF354A	O60765	605 aa	Predicted RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	DUS4L	O95620	317 aa	Known RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	FCGR3A	P08637	254 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	ZNF883	P0CG24	379 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	AKR1C4	P17516	323 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	GRK6	P43250	576 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	SLC6A9	P48067	706 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	CX3CR1	P49238	355 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	DVL1P1	P54792	670 aa	Predicted RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	RPS4X	P62701	263 aa	Known RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	CYCS	P99999	105 aa	Known RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	RASGEF1B	Q0VAM2	473 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	SURF2	Q15527	256 aa	Predicted RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	AWAT1	Q58HT5	328 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	EIF5AL1	Q6IS14	154 aa	Known RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	UBAC2	Q8NBM4	344 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	METTL21A	Q8WXB1	218 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	FAHD2A	Q96GK7	314 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	WDFY3	Q8IZQ1	3526 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	C7orf77	A4D0Y5	90 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	MSGN1	A6NI15	193 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	C4orf47	A7E2U8	309 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	HCRTR2	O43614	444 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	LRP3	O75074	770 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	STK17B	O94768	372 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	ERCC1	P07992	297 aa	Predicted RBP	10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	CCL4	P13236	92 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	ACP1	P24666	158 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	SLC6A8	P48029	635 aa		10.62	□□□□□ -0.71
SPG7-222	ENST00000569820	EGR4	Q05215	589 aa		10.62	□□□□□ -0.71

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