RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 LHX4Q969G2 390 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 CITED1Q99966 193 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 PAPOLGQ9BWT3 736 aaKnown RBP13.78□□□□□ -0.2
CCNF-203ENST00000564236 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4Q9UBX2 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 CLPSL1A2RUU4 121 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 ANXA2P2A6NMY6 339 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
CCNF-203ENST00000564236 CDIPTO14735 213 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 KCNAB3O43448 404 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 KNG1P01042 644 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 HMGN1P05114 100 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 CRYBA1P05813 215 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
CCNF-203ENST00000564236 OSMP13725 252 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 SLC2A5P22732 501 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 OMGP23515 440 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 IER3P46695 156 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 GINS1Q14691 196 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 C1orf122Q6ZSJ8 110 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 TMEM179BQ7Z7N9 219 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 HPSE2Q8WWQ2 592 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 ST8SIA4Q92187 359 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 PGAM5Q96HS1 289 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 LYZL4Q96KX0 146 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 LRGUKQ96M69 825 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
CCNF-203ENST00000564236 CCL13Q99616 98 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 DCTN5Q9BTE1 182 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 RTL8AQ9BWD3 113 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 FGF23Q9GZV9 251 aaPredicted RBP13.77□□□□□ -0.21
CCNF-203ENST00000564236 OR51V1Q9H2C8 321 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 HAO2Q9NYQ3 351 aa13.77□□□□□ -0.21
CCNF-203ENST00000564236 A0A0U1RQK1 487 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 ACOD1A6NK06 481 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 SELENOFO60613 162 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 ALOX5APP20292 161 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 ELF3P78545 371 aaPredicted RBP13.76□□□□□ -0.21
CCNF-203ENST00000564236 POU4F2Q12837 409 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 PRDX4Q13162 271 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 PLBD1Q6P4A8 553 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 DEGS2Q6QHC5 323 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 ZNF788Q6ZQV5 615 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 FGFRL1Q8N441 504 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 FAM216BQ8N7L0 139 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 CANT1Q8WVQ1 401 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 CCDC124Q96CT7 223 aaKnown RBP13.76□□□□□ -0.21
CCNF-203ENST00000564236 SEH1LQ96EE3 360 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 PKP2Q99959 881 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 SLC25A19Q9HC21 320 aa13.76□□□□□ -0.21
CCNF-203ENST00000564236 A0A0U1RQV5 110 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 NDUFB3O43676 98 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 CLPXO76031 633 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 IGLV3-1P01715 115 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 CAV3P56539 151 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 LRRC10Q5BKY1 277 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.75□□□□□ -0.21
CCNF-203ENST00000564236 CMTM4Q8IZR5 234 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 Q8N7P7 452 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 PAPD5Q8NDF8 572 aaKnown RBP13.75□□□□□ -0.21
CCNF-203ENST00000564236 OR8B12Q8NGG6 310 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 ANGPTL6Q8NI99 470 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 CLPTM1LQ96KA5 538 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 DPAGT1Q9H3H5 408 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 PDP1Q9P0J1 537 aaPredicted RBP13.75□□□□□ -0.21
CCNF-203ENST00000564236 KLHDC2Q9Y2U9 406 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 CMYA5Q8N3K9 4069 aa13.75□□□□□ -0.21
CCNF-203ENST00000564236 GPR137BO60478 399 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 IGHV4-59P01825 116 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ANXA8P13928 327 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ATP6V1B1P15313 513 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ROM1Q03395 351 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 GFOD2Q3B7J2 385 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 C17orf107Q6ZR85 190 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 CPOQ8IVL8 374 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ZDHHC23Q8IYP9 409 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 SCCPDHQ8NBX0 429 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 LINC01006Q8NI28 216 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 THEM6Q8WUY1 208 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 LRTOMTQ8WZ04 291 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
CCNF-203ENST00000564236 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 MED30Q96HR3 178 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 GAFA1Q96PS6 74 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 YIPF3Q9GZM5 350 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 WDR13Q9H1Z4 485 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ZNF556Q9HAH1 456 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 BRD7Q9NPI1 651 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 FAM206AQ9NX38 181 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ZNRD1Q9P1U0 126 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 CAB39Q9Y376 341 aaPredicted RBP13.74□□□□□ -0.21
CCNF-203ENST00000564236 LRP12Q9Y561 859 aa13.74□□□□□ -0.21
CCNF-203ENST00000564236 ZNF850A8MQ14 1090 aa13.73□□□□□ -0.21
CCNF-203ENST00000564236 RNASEK-C17orf49H0YIS7 233 aa13.73□□□□□ -0.21
CCNF-203ENST00000564236 M0R1W7 72 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms