RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MEPCEQ7L2J0 689 aaKnown RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF808Q8N4W9 903 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OR10P1Q8NGE3 313 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 SMIM28A0A1B0GU29 152 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC17A3O00476 420 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OGG1O15527 345 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 RAB40ALP0C0E4 278 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PPP1CBP62140 327 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 GPM6BQ13491 265 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 KLF9Q13886 244 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 C9orf57Q5W0N0 161 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 RAB40AQ8WXH6 277 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PCED1BQ96HM7 432 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 POLR3KQ9Y2Y1 108 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OR51B4Q9Y5P0 310 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 KCNE1BA0A087WTH5 132 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PPIHO43447 177 aaKnown RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 HBE1P02100 147 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TAS2R30P59541 319 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TIAL1Q01085 375 aaKnown RBP eCLIP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 RAB32Q13637 225 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OR2T10Q8NGZ9 312 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 HAPLN2Q9GZV7 340 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 INPP5EQ9NRR6 644 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 FBXL17Q9UF56 701 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 NTNG1Q9Y2I2 539 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 H7C1C5 153 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TGFAP01135 160 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 CHRM2P08172 466 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 DBHP09172 617 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 FABP2P12104 132 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PIPP12273 146 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 KITLGP21583 273 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM207Q6UWW9 146 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 FBXW12Q6X9E4 464 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 FA2HQ7L5A8 372 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 ATG4DQ86TL0 474 aaPredicted RBP8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PIPOXQ9P0Z9 390 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 VDAC3Q9Y277 283 aa8.1□□□□□ -1.11
GTF2A1-203ENST00000553612 PTPRMP28827 1452 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 GALR3O60755 368 aaPredicted RBP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 HSBP1O75506 76 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 PNLIPP16233 465 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 THPOP40225 353 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ARL4DP49703 201 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ITPRIPL2Q3MIP1 535 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM251Q8N6I4 163 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 LRRC52Q8N7C0 313 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 LCN9Q8WX39 176 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 PREX2Q70Z35 1606 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 TMEM269A0A1B0GVZ9 245 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 C1QCP02747 245 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 HTR1DP28221 377 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 PPP1R1AQ13522 171 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 TRNP1Q6NT89 227 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 LYG2Q86SG7 212 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 UBE2ZQ9H832 354 aaPredicted RBP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 NRIP3Q9NQ35 241 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 P4HTMQ9NXG6 502 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ADGRB3O60242 1522 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 SLIT1O75093 1534 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 FCN1O00602 326 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 RBFOX2O43251 390 aaKnown RBP eCLIP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 RAMP3O60896 148 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 CTSVO60911 334 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 PTGER3P43115 390 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 FAHD1Q6P587 224 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ATRNO75882 1429 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 A0A0D9SEW6 157 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 SYPL1Q16563 259 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 STPG4Q8N801 248 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 SEH1LQ96EE3 360 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 MRGPRX3Q96LB0 322 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC2A8Q9NY64 477 aa8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 TSSC4Q9Y5U2 329 aaPredicted RBP8.09□□□□□ -1.11
GTF2A1-203ENST00000553612 ITSN1Q15811 1721 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 MEGF11A6BM72 1044 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 OR2T8A6NH00 312 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 H7BY64 318 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 SDCBPO00560 298 aaPredicted RBP8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 OR7C1O76099 320 aaPredicted RBP8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 FAM87AP0C7U9 286 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 ADRA2CP18825 462 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 OPRD1P41143 372 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 MGAT2Q10469 447 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 TMEM255AQ5JRV8 349 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 ZNF787Q6DD87 383 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 CSNK1A1LQ8N752 337 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 BMPERQ8N8U9 685 aa8.09□□□□□ -1.12
GTF2A1-203ENST00000553612 OR4P4Q8NGL7 312 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms