RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SLC22A31A6NKX4 558 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 H3BNX3 289 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 MITFO75030 526 aaPredicted RBP9.46□□□□□ -0.9
RAB5C-203ENST00000546881 FCN3O75636 299 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 PTBP3O95758 552 aaKnown RBP9.46□□□□□ -0.9
RAB5C-203ENST00000546881 TSPAN15O95858 294 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 PSKH1P11801 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 CRISP1P54107 249 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 GMFBP60983 142 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 IKZF1Q13422 519 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 CRMP1Q14194 572 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 PCK2Q16822 640 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 MICBQ29980 383 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 CDONQ4KMG0 1287 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DHRS7BQ6IAN0 325 aaPredicted RBP9.46□□□□□ -0.9
RAB5C-203ENST00000546881 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4L9Q6RFH8 374 aaPredicted RBP9.46□□□□□ -0.9
RAB5C-203ENST00000546881 LDLRAD3Q86YD5 345 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 OR6K6Q8NGW6 343 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 ZNRF4Q8WWF5 429 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 GABARAPL1Q9H0R8 117 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 RIBC2Q9H4K1 309 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 SIRT7Q9NRC8 400 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 DUX4Q9UBX2 424 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.9
RAB5C-203ENST00000546881 VWFP04275 2813 aa9.46□□□□□ -0.9
RAB5C-203ENST00000546881 A0A1B0GVI7 797 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 XRCC2O43543 280 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 CLPXO76031 633 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 GYPBP06028 91 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 ANXA2P07355 339 aaKnown RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 FBP1P09467 338 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 PROK1P58294 105 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 ESRRGP62508 458 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 TIGD6Q17RP2 521 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 GFOD2Q3B7J2 385 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 KLHL12Q53G59 568 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 WDR38Q5JTN6 314 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 TMEM236Q5W0B7 351 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 Q6ZSV7 163 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 DPY19L4Q7Z388 723 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 CMTM4Q8IZR5 234 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 FAM216BQ8N7L0 139 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 SEH1LQ96EE3 360 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 CIB1Q99828 191 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 OR51V1Q9H2C8 321 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 OPA3Q9H6K4 179 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 CMC2Q9NRP2 79 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 TVP23BQ9NYZ1 205 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 CAB39Q9Y376 341 aaPredicted RBP9.45□□□□□ -0.9
RAB5C-203ENST00000546881 KPTNQ9Y664 436 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
RAB5C-203ENST00000546881 FAM183AA6NL82 134 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF593O00488 134 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-203ENST00000546881 NDUFB3O43676 98 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 PAHP00439 452 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 LHBP01229 141 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
RAB5C-203ENST00000546881 HSD11B1P28845 292 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 FMO3P31513 532 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 OTX1P32242 354 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-203ENST00000546881 GNALP38405 381 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 CX3CR1P49238 355 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 ENTPD1P49961 510 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 DLX1P56177 255 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 CSNK2BP67870 215 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 KLRD1Q13241 179 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 KDM4DQ6B0I6 523 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 PLBD1Q6P4A8 553 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 SLC36A1Q7Z2H8 476 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 WDR86Q86TI4 376 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 PQLC1Q8N2U9 271 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 ZSCAN4Q8NAM6 433 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-203ENST00000546881 OR5T2Q8NGG2 359 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 EME1Q96AY2 570 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 REEP6Q96HR9 211 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 C9orf16Q9BUW7 83 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 OSBPL10Q9BXB5 764 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 MED20Q9H944 212 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 SLC25A19Q9HC21 320 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms