RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TEX13DA0A0J9YY54 714 aaPredicted RBP20.47■□□□□ 0.87
FOXA1-202ENST00000545425 A0A1W2PNR3 127 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 MTRF1O75570 445 aaKnown RBP20.47■□□□□ 0.87
FOXA1-202ENST00000545425 NAT2P11245 290 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 LYL1P12980 280 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 ABOP16442 354 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF17P17021 662 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 LUMP51884 338 aaPredicted RBP20.47■□□□□ 0.87
FOXA1-202ENST00000545425 CSNK2A1P68400 391 aaPredicted RBP20.47■□□□□ 0.87
FOXA1-202ENST00000545425 MICBQ29980 383 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 SLC16A14Q7RTX9 510 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 DEFB124Q8NES8 71 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 NTNG2Q96CW9 530 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 PGAM5Q96HS1 289 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 TM2D1Q9BX74 207 aa20.47■□□□□ 0.87
FOXA1-202ENST00000545425 BARX1Q9HBU1 254 aaPredicted RBP20.47■□□□□ 0.87
FOXA1-202ENST00000545425 LY6G6EA0A0G2JKS1 128 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 PMP2P02689 132 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 PET100P0DJ07 73 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 PRKACBP22694 351 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 GFOD2Q3B7J2 385 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 FAM57BQ71RH2 274 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 LHFPL1Q86WI0 220 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 M1APQ8TC57 530 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 MRPS24Q96EL2 167 aaKnown RBP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 ANGPTL4Q9BY76 406 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 FLVCR1Q9Y5Y0 555 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 U3KQA8 63 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 A0A0A6YYD4 124 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 FIGNL2A6NMB9 653 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 RER1O15258 196 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 DHRS3O75911 302 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 TPT1P13693 172 aaKnown RBP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 AKR1C4P17516 323 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 SUCLG1P53597 346 aaKnown RBP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 DSCR4P56555 118 aaPredicted RBP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 TRA2AQ13595 282 aaKnown RBP eCLIP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 PCOLCEQ15113 449 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 PLAC9Q5JTB6 97 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 MARCH1Q8TCQ1 289 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 SAP25Q8TEE9 199 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 RELTQ969Z4 430 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 FAM71F1Q96KD3 344 aaPredicted RBP20.46■□□□□ 0.87
FOXA1-202ENST00000545425 ZNF700Q9H0M5 742 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 GPR160Q9UJ42 338 aa20.46■□□□□ 0.87
FOXA1-202ENST00000545425 C5orf51A6NDU8 294 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 GJE1A6NN92 205 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 F5H0A9 414 aaPredicted RBP20.45■□□□□ 0.86
FOXA1-202ENST00000545425 CRTAPO75718 401 aaPredicted RBP20.45■□□□□ 0.86
FOXA1-202ENST00000545425 CDAP32320 146 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 OR3A4PP47883 348 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 CLDN17P56750 224 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 FOXL2P58012 376 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 EIF5AP63241 154 aaKnown RBP20.45■□□□□ 0.86
FOXA1-202ENST00000545425 MFAP5Q13361 173 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 SMUG1Q53HV7 270 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 SEC22AQ96IW7 307 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 NICN1Q9BSH3 213 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 ZNF160Q9HCG1 818 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 MBD2Q9UBB5 411 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 PCDHGA1Q9Y5H4 931 aa20.45■□□□□ 0.86
FOXA1-202ENST00000545425 FOXI3A8MTJ6 420 aaPredicted RBP20.44■□□□□ 0.86
FOXA1-202ENST00000545425 CCSO14618 274 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 CPT2P23786 658 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 OTX1P32242 354 aaPredicted RBP20.44■□□□□ 0.86
FOXA1-202ENST00000545425 PTGFRP43088 359 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 TMEM50BP56557 158 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 ARFRP1Q13795 201 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 CCDC157Q569K6 752 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 CARD17Q5XLA6 110 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 ADAD2Q8NCV1 583 aaKnown RBP20.44■□□□□ 0.86
FOXA1-202ENST00000545425 TMEM104Q8NE00 496 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 CASTOR1Q8WTX7 329 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 EMG1Q92979 244 aaKnown RBP20.44■□□□□ 0.86
FOXA1-202ENST00000545425 TAS2R3Q9NYW6 316 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 DNAJB11Q9UBS4 358 aa20.44■□□□□ 0.86
FOXA1-202ENST00000545425 FAM25EA8MYX2 175 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 SOCS1O15524 211 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 AMY2BP19961 511 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 SERPINF1P36955 418 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 OR3A2P47893 321 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 PPIAP62937 165 aaKnown RBP20.43■□□□□ 0.86
FOXA1-202ENST00000545425 DBX2Q6ZNG2 339 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 KCTD9Q7L273 389 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 SLC30A7Q8NEW0 376 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 PIK3IP1Q96FE7 263 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 ZNF416Q9BWM5 594 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 CHST5Q9GZS9 411 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 MEMO1Q9Y316 297 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 ASCC3Q8N3C0 2202 aaKnown RBP20.43■□□□□ 0.86
FOXA1-202ENST00000545425 FGF16O43320 207 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 SFTPDP35247 375 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 ZNF84P51523 738 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 ZNF273Q14593 569 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 KISS1Q15726 138 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 SPTSSAQ969W0 71 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 MARC2Q969Z3 335 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 DMRTA2Q96SC8 542 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 S100A13Q99584 98 aa20.43■□□□□ 0.86
FOXA1-202ENST00000545425 MESP1Q9BRJ9 268 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms