RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 OR10AD1Q8NGE0 317 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OR5L2Q8NGL0 311 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 RHBDD1Q8TEB9 315 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CORO2AQ92828 525 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SPRY4Q9C004 299 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SELENOIQ9C0D9 397 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 PLEKHA2Q9HB19 425 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TAF9BQ9HBM6 251 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 APOBEC3BQ9UH17 382 aaKnown RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 ASF1AQ9Y294 204 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 MED31Q9Y3C7 131 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SMCO3A2RU48 225 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 FAM183AA6NL82 134 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 PPP5D1E7EU14 171 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 M0R143 59 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SLC31A1O15431 190 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 LY86O95711 162 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ABHD16AO95870 558 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 DBIP07108 87 aaKnown RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 THBS4P35443 961 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ARL3P36405 182 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ECI1P42126 302 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 GATA4P43694 442 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SELENOVP59797 346 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 VAMP2P63027 116 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SUMO1P63165 101 aaKnown RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 SKP2Q13309 424 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SURF2Q15527 256 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 RAB11BQ15907 218 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 GUK1Q16774 197 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TP53I3Q53FA7 332 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 KHDC3LQ587J8 217 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ADAM5Q6NVV9 412 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 UNQ6126/PRO20091Q6UXV3 157 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SLC16A9Q7RTY1 509 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SLC35E3Q7Z769 313 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 KMT5CQ86Y97 462 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OR9K2Q8NGE7 335 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OR10D4PQ8NGN7 298 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OR5K2Q8NHB8 316 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TMEM255BQ8WV15 326 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OIT3Q8WWZ8 545 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 AQP3Q92482 292 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CMBLQ96DG6 245 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 AKR1E2Q96JD6 320 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 C2orf50Q96LR7 162 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ZNF385AQ96PM9 386 aaKnown RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 OR7D2Q96RA2 312 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CITED1Q99966 193 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 DDA1Q9BW61 102 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ANGPTL4Q9BY76 406 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HRH4Q9H3N8 390 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 GAL3ST2Q9H3Q3 398 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 FBXO34Q9NWN3 711 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 VSIG4Q9Y279 399 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 VPS13AQ96RL7 3174 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CPED1A4D0V7 1026 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TLCD2A6NGC4 264 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BKO60814 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 AMY2AP04746 511 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BJP06899 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SFTPBP07988 381 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CELA2BP08218 269 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 NME2P22392 152 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BOP23527 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BBP33778 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 GABRA4P48169 554 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 PDLIM4P50479 330 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 DUSP3P51452 185 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BDP58876 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BCP62807 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 RPS15P62841 145 aaKnown RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 IL13RA1P78552 427 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 H3F3AP84243 136 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HSPB3Q12988 150 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 RTP5Q14D33 572 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST2H2BEQ16778 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TMEM128Q5BJH2 165 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 VAX1Q5SQQ9 334 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CLEC9AQ6UXN8 241 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 DPY19L2P2Q6ZN68 376 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 LINC00696Q6ZRV3 163 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TMEM183AQ8IXX5 376 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 PRSS58Q8IYP2 241 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 OR10J5Q8NHC4 309 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 CD300LFQ8TDQ1 290 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SKA2Q8WVK7 121 aaPredicted RBP4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BHQ93079 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 SLC41A2Q96JW4 573 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 TBX5Q99593 518 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BNQ99877 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 HIST1H2BMQ99879 126 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 GINS3Q9BRX5 216 aa4.67□□□□□ -1.66
USP28-213ENST00000544967 COMMD4Q9H0A8 199 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms