RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 HS3ST5Q8IZT8 346 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 ITFG2Q969R8 447 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 ZDHHC16Q969W1 377 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 RTL8AQ9BWD3 113 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 SLC25A19Q9HC21 320 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 NOX4Q9NPH5 578 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 POMPQ9Y244 141 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 RHBDD3Q9Y3P4 386 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 MDFIC2A0A1B0GVS7 189 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 DVL1O14640 695 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 PIN1P1O15428 100 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 HOXA3O43365 443 aaPredicted RBP13.4□□□□□ -0.26
DDX55-212ENST00000544738 DNAJC8O75937 253 aaPredicted RBP13.4□□□□□ -0.26
DDX55-212ENST00000544738 PRB2P02812 416 aaPredicted RBP13.4□□□□□ -0.26
DDX55-212ENST00000544738 ALOX5APP20292 161 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 PDCD1Q15116 288 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 TAF9Q16594 264 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 WDR82Q6UXN9 313 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 BRD3OSQ6XYD6 125 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 SLC36A1Q7Z2H8 476 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 WDR86Q86TI4 376 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.26
DDX55-212ENST00000544738 SLC7A6OSQ96CW6 309 aaPredicted RBP13.4□□□□□ -0.26
DDX55-212ENST00000544738 ITPKCQ96DU7 683 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 DMRTB1Q96MA1 342 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 TLNRD1Q9H1K6 362 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 LAMP5Q9UJQ1 280 aa13.4□□□□□ -0.26
DDX55-212ENST00000544738 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 ACOD1A6NK06 481 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 SLC22A31A6NKX4 558 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 TMEM210A6NLX4 147 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 CDIPTO14735 213 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 GPR37O15354 613 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 TSPAN15O95858 294 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 CST4P01036 141 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 SLC2A5P22732 501 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 CRISP1P54107 249 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 PSMA6P60900 246 aaKnown RBP13.39□□□□□ -0.27
DDX55-212ENST00000544738 PRDX4Q13162 271 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 DEFB112Q30KQ8 113 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 Q6ZPA2 131 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 BBS1Q8NFJ9 593 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 OR10Z1Q8NGY1 313 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 GATAD2BQ8WXI9 593 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 FAM71F1Q96KD3 344 aaPredicted RBP13.39□□□□□ -0.27
DDX55-212ENST00000544738 HIST1H2AAQ96QV6 131 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 TEAD3Q99594 435 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
DDX55-212ENST00000544738 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 TMEM14AQ9Y6G1 99 aa13.39□□□□□ -0.27
DDX55-212ENST00000544738 IGHV3OR15-7A0A075B7D8 119 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 SFTPBP07988 381 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 MMP9P14780 707 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 MAP2K3P46734 347 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 CSNK2BP67870 215 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 RELBQ01201 579 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 POU4F2Q12837 409 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 APOFQ13790 326 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 FAM76BQ5HYJ3 339 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
DDX55-212ENST00000544738 OR5P3Q8WZ94 311 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 ST8SIA4Q92187 359 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 PIGCQ92535 297 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 TBX15Q96SF7 602 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 MROQ9BYG7 248 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 PRRG3Q9BZD7 231 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 SIRPDQ9H106 197 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 DNTTIP1Q9H147 329 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 CNTD2Q9H8S5 307 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
DDX55-212ENST00000544738 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
DDX55-212ENST00000544738 A0A0U1RQV5 110 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ZNF850A8MQ14 1090 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.37□□□□□ -0.27
DDX55-212ENST00000544738 ZNF254O75437 659 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ACKR3P25106 362 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 DCTDP32321 178 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ARF6P62330 175 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ESRRGP62508 458 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 WDR38Q5JTN6 314 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ATPAF1Q5TC12 328 aaPredicted RBP13.37□□□□□ -0.27
DDX55-212ENST00000544738 FAHD1Q6P587 224 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 Q6YL49 198 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 TMEM86BQ8N661 226 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 OR8B12Q8NGG6 310 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 FAM81AQ8TBF8 368 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 ASB17Q8WXJ9 295 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms