RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 C3orf56Q8N813 242 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 TMEM163Q8TC26 289 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ASB17Q8WXJ9 295 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 RPL3LQ92901 407 aaKnown RBP13.61□□□□□ -0.23
CCND1-205ENST00000542367 PPP1R14AQ96A00 147 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 SEH1LQ96EE3 360 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 RNF170Q96K19 258 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 C1orf147Q96MC9 270 aaPredicted RBP13.61□□□□□ -0.23
CCND1-205ENST00000542367 OR8B4Q96RC9 309 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 CCL13Q99616 98 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 PKP2Q99959 881 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 PCGF1Q9BSM1 259 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 TTTY10Q9BZA0 68 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 FGF23Q9GZV9 251 aaPredicted RBP13.61□□□□□ -0.23
CCND1-205ENST00000542367 PBOV1Q9GZY1 135 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 TLNRD1Q9H1K6 362 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ABCB9Q9NP78 766 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 KAAG1Q9UBP8 84 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 TMEM14AQ9Y6G1 99 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 A0A0U1RQV5 110 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 A0A1B0GW55 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 TMEM210A6NLX4 147 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 ZNF879B4DU55 563 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.6□□□□□ -0.23
CCND1-205ENST00000542367 ZNF254O75437 659 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L2P0CJ85 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L3P0CJ86 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L4P0CJ87 422 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L5P0CJ88 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L6P0CJ89 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L7P0CJ90 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DCTDP32321 178 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 MAP2K3P46734 347 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 RIDAP52758 137 aaKnown RBP13.6□□□□□ -0.23
CCND1-205ENST00000542367 GMFBP60983 142 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 FAM76BQ5HYJ3 339 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 WDR38Q5JTN6 314 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 GPR157Q5UAW9 335 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 AADACL4Q5VUY2 407 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 NXNL2Q5VZ03 156 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 C12orf73Q69YU5 71 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
CCND1-205ENST00000542367 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 KCTD8Q6ZWB6 473 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 ZDHHC23Q8IYP9 409 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 PNLDC1Q8NA58 520 aaKnown RBP13.6□□□□□ -0.23
CCND1-205ENST00000542367 FAM81AQ8TBF8 368 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 HPSE2Q8WWQ2 592 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 HIST1H2AAQ96QV6 131 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 IL4I1Q96RQ9 567 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 CNN2Q99439 309 aaKnown RBP13.6□□□□□ -0.23
CCND1-205ENST00000542367 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 DUX4Q9UBX2 424 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 IKZF2Q9UKS7 526 aa13.6□□□□□ -0.23
CCND1-205ENST00000542367 ZNF816-ZNF321PA0A0X1KG74 233 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 MDFIC2A0A1B0GVS7 189 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 SLC22A31A6NKX4 558 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 SRRM5B3KS81 715 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 TOX4O94842 621 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 ECDO95905 644 aaPredicted RBP13.59□□□□□ -0.23
CCND1-205ENST00000542367 SFTPBP07988 381 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 FCGR1AP12314 374 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 CXCR4P61073 352 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 AWAT1Q58HT5 328 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 SLC36A1Q7Z2H8 476 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 FGFRL1Q8N441 504 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 SCCPDHQ8NBX0 429 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 OR5T2Q8NGG2 359 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 OR10Z1Q8NGY1 313 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 ST8SIA4Q92187 359 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 FAM71F1Q96KD3 344 aaPredicted RBP13.59□□□□□ -0.23
CCND1-205ENST00000542367 WDFY2Q96P53 400 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 TBX15Q96SF7 602 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 CIB1Q99828 191 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 APOL4Q9BPW4 351 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 ZMAT3Q9HA38 289 aaKnown RBP13.59□□□□□ -0.23
CCND1-205ENST00000542367 ADGRL4Q9HBW9 690 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 HAO2Q9NYQ3 351 aa13.59□□□□□ -0.23
CCND1-205ENST00000542367 P2RY10O00398 339 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 MAGEB4O15481 346 aaPredicted RBP13.58□□□□□ -0.24
CCND1-205ENST00000542367 HKR1P10072 659 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 MMP9P14780 707 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 AMY2BP19961 511 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 POLR2IP36954 125 aaKnown RBP13.58□□□□□ -0.24
CCND1-205ENST00000542367 BPIFB3P59826 476 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 ARF6P62330 175 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 SLC9A3R2Q15599 337 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 DEFB112Q30KQ8 113 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 C11orf91Q3C1V1 193 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 ZNF829Q3KNS6 432 aaPredicted RBP13.58□□□□□ -0.24
CCND1-205ENST00000542367 DMRTC1Q5HYR2 192 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 CEP78Q5JTW2 689 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 ZNF322Q6U7Q0 402 aaPredicted RBP13.58□□□□□ -0.24
CCND1-205ENST00000542367 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 THAP5Q7Z6K1 395 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 SLC35F2Q8IXU6 374 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms