RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TCTN2Q96GX1 697 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 GPER1Q99527 375 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 NDUFS6O75380 124 aaKnown RBP12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 CLN5O75503 358 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 AGAP20933 346 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 HSF1Q00613 529 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 ACY1Q03154 408 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 NCMAPQ5T1S8 102 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 ASH2LQ9UBL3 628 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 SRPK3Q9UPE1 567 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 OSGIN2Q9Y236 505 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 NSDHLQ15738 373 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 LHFPL1Q86WI0 220 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 WWTR1Q9GZV5 400 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 GPR84Q9NQS5 396 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 K7EPK0 472 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CTHP32929 405 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 TLE3Q04726 772 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 LANCL3Q6ZV70 420 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 OR8B12Q8NGG6 310 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 LIN37Q96GY3 246 aaPredicted RBP12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 LRRC61Q9BV99 259 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CHRDQ9H2X0 955 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 LHFPL6Q9Y693 200 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 IGKV1-9A0A0C4DH69 117 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CEACAM18A8MTB9 384 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 SEMA4FO95754 770 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CST4P01036 141 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 Q7L0L9 218 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 DTX1Q86Y01 620 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 OR51T1Q8NGJ9 327 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
SCNN1A-215ENST00000540037 BLACEA4D250 179 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 ADAM10O14672 748 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 RER1O15258 196 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 S100A8P05109 93 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 CHRM2P08172 466 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 THBS4P35443 961 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF121P58317 390 aaPredicted RBP12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 C1orf189Q5VU69 101 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 ADAMTS18Q8TE60 1221 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 DAZLQ92904 295 aaKnown RBP12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 RGCCQ9H4X1 137 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF701Q9NV72 531 aaPredicted RBP12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 DNAJB11Q9UBS4 358 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 POLR1DQ9Y2S0 133 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
SCNN1A-215ENST00000540037 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 TSPAN15O95858 294 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 MT-ND4LP03901 98 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 GSTP1P09211 210 aaKnown RBP12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 GABRG2P18507 467 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 RABIFP47224 123 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 CAPZBP47756 277 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 GSK3AP49840 483 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 ASCL1P50553 236 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 SP6Q3SY56 376 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF561Q8N587 486 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 OR9K2Q8NGE7 335 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 KCNG3Q8TAE7 436 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 OCSTAMPQ9BR26 566 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 HPNP05981 417 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 RAB5AP20339 215 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 C9orf50Q5SZB4 431 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 DEGS2Q6QHC5 323 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 H1FNTQ75WM6 255 aaPredicted RBP12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 WFDC1Q9HC57 220 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 CUTCQ9NTM9 273 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 FBXO7Q9Y3I1 522 aa12.27□□□□□ -0.45
SCNN1A-215ENST00000540037 MASP2O00187 686 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 XRCC2O43543 280 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 PET100P0DJ07 73 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 SERPINA2P20848 420 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 BLVRBP30043 206 aaPredicted RBP12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 GALNSP34059 522 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 SNCAP37840 140 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 FBXW4P57775 412 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 DNM1P34Q6PK57 102 aa12.26□□□□□ -0.45
SCNN1A-215ENST00000540037 DEFB119Q8N690 84 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms