RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FBXL13Q8NEE6 735 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR4F6Q8NGB9 312 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR52K1Q8NGK4 314 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 TM4SF19Q96DZ7 209 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 HIST1H4GQ99525 98 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 APOL2Q9BQE5 337 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 UGT1A8Q9HAW9 530 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 BOKQ9UMX3 212 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 CSDC2Q9Y534 153 aaKnown RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FLVCR1Q9Y5Y0 555 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 IGHV7-81A0A0B4J1V7 117 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 A0A0J9YYE9 177 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 WI2-2373I1.2A0A1W2PRP0 233 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 CLPSL1A2RUU4 121 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 FAM25EA8MYX2 175 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 LOC110117498-PIK3R3F6TDL0 507 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 KIF2AO00139 706 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DFFAO00273 331 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DLGAP1O14490 977 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DUSP14O95147 198 aaKnown RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 TRBC1P01850 177 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 C2P06681 752 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 GATA1P15976 413 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 HTR1FP30939 366 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 SHMT2P34897 504 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DDOSTP39656 456 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLCO1A2P46721 670 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC25A1P53007 311 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 KRTAP10-3P60369 221 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 KRTAP10-11P60412 298 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 ERVK-25P63136 954 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DOC2AQ14183 400 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 HADHQ16836 314 aaKnown RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 C11orf71Q6IPW1 123 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 TMEM220Q6QAJ8 160 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PGAP1Q75T13 922 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 C12orf56Q8IXR9 622 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 BPIFCQ8NFQ6 507 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR52H1Q8NGJ2 320 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PYROXD1Q8WU10 500 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 ANKRD49Q8WVL7 239 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PEX13Q92968 403 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 FMO2Q99518 471 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 KCTD14Q9BQ13 255 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 ACTR6Q9GZN1 396 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 DNTTIP1Q9H147 329 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 FOLH1BQ9HBA9 442 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PDFQ9HBH1 243 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 CBLN4Q9NTU7 201 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 MRPL22Q9NWU5 206 aaKnown RBP3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PITPNC1Q9UKF7 332 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 PDE10AQ9Y233 779 aa3.57□□□□□ -1.84
HMGB1P23-201ENST00000518743 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 SHISA9B4DS77 424 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 H7C417 338 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 TNFSF13O75888 250 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 LGI1O95970 557 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 MSMBP08118 114 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 GZMAP12544 262 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 TBPP20226 339 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZP3P21754 424 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 HMGCLP35914 325 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 PTGDSP41222 190 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 RAB10P61026 200 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 MAXP61244 160 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 PAX2Q02962 417 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 BSPH1Q075Z2 132 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 ASAH1Q13510 395 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 LRRC36Q1X8D7 754 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 CEP85LQ5SZL2 805 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 NCMAPQ5T1S8 102 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 C9orf135Q5VTT2 229 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 SCIMPQ6UWF3 145 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 RTL4Q6ZR62 310 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 PPP1R27Q86WC6 154 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 VRK2Q86Y07 508 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 SKA3Q8IX90 412 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 GABRG1Q8N1C3 465 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 MUC15Q8N387 334 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 FTMTQ8N4E7 242 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 TRAM1L1Q8N609 369 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 TPRX1Q8N7U7 411 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR51F2Q8NH61 342 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 PIH1D2Q8WWB5 315 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 PAGE5Q96GU1 130 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 MBOAT4Q96T53 435 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 GAL3ST1Q99999 423 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 RANBP3Q9H6Z4 567 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 MRPL47Q9HD33 250 aaKnown RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 RPRD1BQ9NQG5 326 aaKnown RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 CHRAC1Q9NRG0 131 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 TNFRSF19Q9NS68 423 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 C20orf96Q9NUD7 363 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 LYARQ9NX58 379 aaKnown RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 THUMPD1Q9NXG2 353 aaKnown RBP3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 KCNIP3Q9Y2W7 256 aa3.56□□□□□ -1.84
HMGB1P23-201ENST00000518743 ARFGEF3Q5TH69 2177 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms