RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ALOX5APP20292 161 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 SLC2A5P22732 501 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 PRDX4Q13162 271 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 CDONQ4KMG0 1287 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 ATPAF1Q5TC12 328 aaPredicted RBP16.29■□□□□ 0.2
SFXN1-203ENST00000502393 LY6G5BQ8NDX9 201 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 OR10Z1Q8NGY1 313 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 LHX4Q969G2 390 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 LYZL4Q96KX0 146 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 YIPF3Q9GZM5 350 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 SLITRK2Q9H156 845 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 KLHDC2Q9Y2U9 406 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 LRP12Q9Y561 859 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 MMP24Q9Y5R2 645 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 POMT1Q9Y6A1 747 aa16.29■□□□□ 0.2
SFXN1-203ENST00000502393 A0A1B0GUS0 222 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 FAM181BA6NEQ2 426 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 ACOD1A6NK06 481 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 NDUFB3O43676 98 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 MELTFP08582 738 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 APOFQ13790 326 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 TMEM236Q5W0B7 351 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 KCTD18Q6PI47 426 aaPredicted RBP16.28■□□□□ 0.2
SFXN1-203ENST00000502393 DEGS2Q6QHC5 323 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 KRT77Q7Z794 578 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 OR8B12Q8NGG6 310 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 PIGCQ92535 297 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 TAF15Q92804 592 aaKnown RBP eCLIP16.28■□□□□ 0.2
SFXN1-203ENST00000502393 ITFG2Q969R8 447 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 SEH1LQ96EE3 360 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 NRBF2Q96F24 287 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 PKP2Q99959 881 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 DNTTIP1Q9H147 329 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 HAO2Q9NYQ3 351 aa16.28■□□□□ 0.2
SFXN1-203ENST00000502393 A0A1B0GVI7 797 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 A0A1B0GW55 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 CRYBA1P05813 215 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L2P0CJ85 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L3P0CJ86 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L4P0CJ87 422 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L5P0CJ88 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L6P0CJ89 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L7P0CJ90 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 MDKP21741 143 aaPredicted RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 TGM4P49221 684 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 ELF3P78545 371 aaPredicted RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 SNAPC1Q16533 368 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 LRRC10Q5BKY1 277 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 STUMQ69YW2 141 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4L9Q6RFH8 374 aaPredicted RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 FIP1L1Q6UN15 594 aaKnown RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 KCTD8Q6ZWB6 473 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 KRT74Q7RTS7 529 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 ZDHHC23Q8IYP9 409 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 FAM216BQ8N7L0 139 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 SCCPDHQ8NBX0 429 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 TBC1D15Q8TC07 691 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 SSMEM1Q8WWF3 244 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 RPL3LQ92901 407 aaKnown RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 RNF170Q96K19 258 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 RAB3IPQ96QF0 476 aaPredicted RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 HIST1H2AAQ96QV6 131 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 TEAD3Q99594 435 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 PAPOLBQ9NRJ5 636 aaKnown RBP16.27■□□□□ 0.2
SFXN1-203ENST00000502393 TNFRSF19Q9NS68 423 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 TVP23BQ9NYZ1 205 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DNAJB11Q9UBS4 358 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 DUX4Q9UBX2 424 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 POMPQ9Y244 141 aa16.27■□□□□ 0.2
SFXN1-203ENST00000502393 A0A0U1RQV5 110 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 DNAJC8O75937 253 aaPredicted RBP16.26■□□□□ 0.19
SFXN1-203ENST00000502393 OMGP23515 440 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 HCCSP53701 268 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 CRISP1P54107 249 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 IKZF1Q13422 519 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 VMO1Q7Z5L0 202 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 FGFRL1Q8N441 504 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 BCAS4Q8TDM0 211 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 SLC7A6OSQ96CW6 309 aaPredicted RBP16.26■□□□□ 0.19
SFXN1-203ENST00000502393 MROQ9BYG7 248 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 CHIAQ9BZP6 476 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 BEX1Q9HBH7 125 aa16.26■□□□□ 0.19
SFXN1-203ENST00000502393 ZNF816-ZNF321PA0A0X1KG74 233 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 AMY2BP19961 511 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 DCTDP32321 178 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 MAP2K3P46734 347 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 RPL15P61313 204 aaKnown RBP16.25■□□□□ 0.19
SFXN1-203ENST00000502393 LCN1P1Q5VSP4 162 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 FAHD1Q6P587 224 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 METAP1DQ6UB28 335 aaPredicted RBP16.25■□□□□ 0.19
SFXN1-203ENST00000502393 CMTM4Q8IZR5 234 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 KIR3DL3Q8N743 410 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 OR5T2Q8NGG2 359 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 OR4F5Q8NH21 305 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 C8orf46Q8TAG6 207 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 HPSE2Q8WWQ2 592 aa16.25■□□□□ 0.19
SFXN1-203ENST00000502393 MED30Q96HR3 178 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms