RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 DEGS1O15121 323 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 HMGB3O15347 200 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 OR1F1O43749 312 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 AGFG2O95081 481 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FCGR2AP12318 317 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 NTF3P20783 257 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 PRKACGP22612 351 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MMP11P24347 488 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 OR10J1P30954 320 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FGF9P31371 208 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 KIR2DS4P43632 304 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ATP1B3P54709 279 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 RPS23P62266 143 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 UPP1Q16831 310 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 TMEM176BQ3YBM2 270 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 TIMM50Q3ZCQ8 353 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 C1orf220Q5T0J3 134 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 HIST2H2BDQ6DRA6 164 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 GLIPR1L1Q6UWM5 242 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ZNF571Q7Z3V5 609 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 KLHDC8AQ8IYD2 350 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 TCTEX1D1Q8N7M0 179 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 CHST4Q8NCG5 386 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 LINC00116Q8NCU8 138 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 IL17DQ8TAD2 202 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SNIP1Q8TAD8 396 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 SLC35B2Q8TB61 432 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 HOXB13Q92826 284 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 EAF2Q96CJ1 260 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 SEC22AQ96IW7 307 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 LINC00477Q96M19 166 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 RASL10BQ96S79 203 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 BOLA2Q9H3K6 86 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SLC25A19Q9HC21 320 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 EXOSC4Q9NPD3 245 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 ZNF358Q9NW07 568 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ARL15Q9NXU5 204 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 TFCP2L1Q9NZI6 479 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 KLHL13Q9P2N7 655 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 PRSS50Q9UI38 385 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 OSGIN2Q9Y236 505 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 DOCK3Q8IZD9 2030 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 CAMSAP1Q5T5Y3 1602 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ABCA6Q8N139 1617 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SHPRHQ149N8 1683 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 RIC1Q4ADV7 1423 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 A0A1W2PR77 199 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MAP1LC3B2A6NCE7 125 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FAM90A20PA6NIJ5 464 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 J3KR12 359 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SLC17A3O00476 420 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 THY1P04216 161 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 HKR1P10072 659 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SDC1P18827 310 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 USF1P22415 310 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 F2RP25116 425 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FCGR2BP31994 310 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 OR3A2P47893 321 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 DAP3P51398 398 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 CRADDP78560 199 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ID3Q02535 119 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 EIF2B1Q14232 305 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 OR8B8Q15620 311 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ZNF260Q3ZCT1 412 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 CRB2Q5IJ48 1285 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FAM71E1Q6IPT2 247 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 CNIH2Q6PI25 160 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
CUL3-212ENST00000497715 FRRS1Q6ZNA5 592 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 Q6ZSR9 355 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 WFDC3Q8IUB2 231 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SAMD12Q8N8I0 201 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 OR2I1PQ8NGU4 316 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 LGALS14Q8TCE9 139 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MRAPQ8TCY5 172 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 Q8WTZ3 238 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SCARF2Q96GP6 870 aaPredicted RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 SEPHS2Q99611 448 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 COPS8Q99627 209 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MGLLQ99685 303 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 MAP1LC3BQ9GZQ8 125 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 CWH43Q9H720 699 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 RDH14Q9HBH5 336 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 SLC17A5Q9NRA2 495 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 TAS2R8Q9NYW2 309 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 ZNF581Q9P0T4 197 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 NAT8Q9UHE5 227 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 BTRCQ9Y297 605 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 AK6Q9Y3D8 172 aaKnown RBP4.45□□□□□ -1.7
CUL3-212ENST00000497715 CCDC88CQ9P219 2028 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 PHLPP1O60346 1717 aa4.45□□□□□ -1.7
CUL3-212ENST00000497715 KIAA0556O60303 1618 aa4.44□□□□□ -1.7
CUL3-212ENST00000497715 OR2M5A3KFT3 312 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms