RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TCRBP04435 133 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 MELTFP08582 738 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 FAM90A15PP0C7V4 464 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 FAM90A13PP0C7W8 464 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 FAM90A14PP0C7W9 464 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 FAM90A24PP0C7X0 464 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SELEP16581 610 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 CPT2P23786 658 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 STOMP27105 288 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 APLNRP35414 380 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PMELP40967 661 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ECI1P42126 302 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 KIR2DL3P43628 341 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 HTR5AP47898 357 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PTH2RP49190 550 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 STARP49675 285 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 FUT6P51993 359 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 MRPS15P82914 257 aaKnown RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SRYQ05066 204 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SPOCK1Q08629 439 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 MAB21L1Q13394 359 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 KLF9Q13886 244 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF169Q14929 603 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 CDK10Q15131 360 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 RBMS2Q15434 407 aaKnown RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TGIF1Q15583 401 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TATDN3Q17R31 274 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 KRTAP27-1Q3LI81 207 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PLA1AQ53H76 456 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 AWAT2Q6E213 333 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PRSS45Q7RTY3 260 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TMEM17Q86X19 198 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ANGPTL5Q86XS5 388 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 KRTAP1-3Q8IUG1 177 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SNX29P2Q8IUI4 249 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF584Q8IVC4 421 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TUSC5Q8IXB3 177 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF101Q8IZC7 436 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 GABRG1Q8N1C3 465 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 UBE2J2Q8N2K1 259 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF843Q8N446 348 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 LRRC18Q8N456 261 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 C17orf78Q8N4C9 275 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ZSCAN4Q8NAM6 433 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TMEM229BQ8NBD8 167 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 OR14K1Q8NGZ2 314 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 OR10AC1Q8NH08 325 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SNRNP27Q8WVK2 155 aaKnown RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SPSB4Q96A44 273 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 HIST1H2AAQ96QV6 131 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 GFI1Q99684 422 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PRRT1Q99946 306 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 C1QTNF5Q9BXJ0 243 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 TMEM59Q9BXS4 323 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ALX4Q9H161 411 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 METTL9Q9H1A3 318 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 MED28Q9H204 178 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SLC6A15Q9H2J7 730 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 PLK3Q9H4B4 646 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 RANBP3Q9H6Z4 567 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 AUNIPQ9H7T9 357 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 NLKQ9UBE8 527 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 EIF3KQ9UBQ5 218 aaKnown RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 EDARQ9UNE0 448 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 ING4Q9UNL4 249 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 MRPS28Q9Y2Q9 187 aaKnown RBP5.56□□□□□ -1.52
SF3A3-208ENST00000489537 RNF114Q9Y508 228 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 CPAMD8Q8IZJ3 1885 aa5.56□□□□□ -1.52
SF3A3-208ENST00000489537 SDK2Q58EX2 2172 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 A0A1B0GTH9 108 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 A0A1B0GUH1 482 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 C7orf66A4D0T2 115 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PINLYPA6NC86 204 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 A6NL46 340 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 SNRPGP15A8MWD9 76 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 TMEM14DPA8MWL7 114 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF736B4DX44 427 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 NKX2-8O15522 239 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 RRP8O43159 456 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 WDR1O75083 606 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 CSTBP04080 98 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 IL5P05113 134 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 B4GALT1P15291 398 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ZNF32P17041 273 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 MPZP25189 248 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ERP29P30040 261 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PTGFRP43088 359 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 OR3A2P47893 321 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 EIF2B2P49770 351 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 RBP2P50120 134 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 MECP2P51608 486 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 TAS2R46P59540 309 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 RRAS2P62070 204 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 ARF1P84077 181 aaKnown RBP5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PSG4Q00888 419 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 MZT1Q08AG7 82 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 PMPCAQ10713 525 aa5.55□□□□□ -1.52
SF3A3-208ENST00000489537 GK2Q14410 553 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms