RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 IGKV1-39P01597 117 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 TRBV12-3P01733 135 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 HBE1P02100 147 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 IGKV1D-39P04432 117 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 PGA4P0DJD7 388 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 PGA3P0DJD8 388 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 P0DMU3 169 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 FAM231AP0DMU4 169 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 FAM231CP0DMU5 169 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 GZMHP20718 246 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 GGT2P36268 569 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 HNMTP50135 292 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 RAB7AP51149 207 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 FABP6P51161 128 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 CCL23P55773 120 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 ZMYND11Q15326 602 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 C6orf99Q4VX62 202 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 XKR7Q5GH72 579 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 METAP1DQ6UB28 335 aaPredicted RBP0.43□□□□□ -2.34
CCDC93-209ENST00000488908 SPESP1Q6UW49 350 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 ZYG11AQ6WRX3 759 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 Q6ZQT7 251 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 PDPNQ86YL7 162 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 C3orf22Q8N5N4 141 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 TEX9Q8N6V9 391 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 ZFP62Q8NB50 900 aaPredicted RBP0.43□□□□□ -2.34
CCDC93-209ENST00000488908 BPIFB6Q8NFQ5 453 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 OR10W1Q8NGF6 305 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 OR1S1Q8NH92 325 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 RBPMSQ93062 196 aaKnown RBP0.43□□□□□ -2.34
CCDC93-209ENST00000488908 NT5C3BQ969T7 300 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 SGTBQ96EQ0 304 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 SLC25A44Q96H78 314 aaPredicted RBP0.43□□□□□ -2.34
CCDC93-209ENST00000488908 Q96MT0 163 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 TSGA13Q96PP4 275 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 ALS2CR12Q96Q35 445 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 GPR21Q99679 349 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 CALN1Q9BXU9 219 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 PKIBQ9C010 78 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 RDH14Q9HBH5 336 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 CLN6Q9NWW5 311 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 SLC17A4Q9Y2C5 497 aa0.43□□□□□ -2.34
CCDC93-209ENST00000488908 BAZ1BQ9UIG0 1483 aaKnown RBP0.42□□□□□ -2.34
CCDC93-209ENST00000488908 LOC102724200A0A096LPH7 203 aaPredicted RBP0.42□□□□□ -2.34
CCDC93-209ENST00000488908 CCL15-CCL14A0A0B4J2E2 113 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 A0A0G2JMP0 313 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 TRBV11-1A0A0K0K1C0 115 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 A0A0X1KG70 313 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 GMNCA6NCL1 334 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 GOLGA8JA6NMD2 632 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 G3V3Q6 166 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 CXCL11O14625 94 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 MYL12BO14950 172 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 SLC16A7O60669 478 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 PTHP01270 115 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 GOLGA8HP0CJ92 632 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 RAB5AP20339 215 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 BMI1P35226 326 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 MYCNOSP40205 109 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 MRPL19P49406 292 aaKnown RBP0.42□□□□□ -2.34
CCDC93-209ENST00000488908 ACTR1AP61163 376 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 CCL15Q16663 113 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 HSP90AB3PQ58FF7 597 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 GCSAMLQ5JQS6 135 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 CENPPQ6IPU0 288 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 NANOGNBQ7Z5D8 188 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 DNAAF3Q8N9W5 541 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 OR8K1Q8NGG5 319 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 OR9G4Q8NGQ1 327 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 ACMSDQ8TDX5 336 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 ZYG11BQ9C0D3 744 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 ACTR3CQ9C0K3 210 aaPredicted RBP0.42□□□□□ -2.34
CCDC93-209ENST00000488908 TUBA4BQ9H853 241 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 CYP3A43Q9HB55 503 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 FANCEQ9HB96 536 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 TREX1Q9NSU2 369 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 PISDQ9UG56 409 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 SAR1BQ9Y6B6 198 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 COMMD3-BMI1R4GMX3 469 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 RP1L1Q8IWN7 2480 aaPredicted RBP0.42□□□□□ -2.34
CCDC93-209ENST00000488908 JCADQ9P266 1359 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 DOCK10Q96BY6 2186 aa0.42□□□□□ -2.34
CCDC93-209ENST00000488908 BRCA1P38398 1863 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 NPHP4O75161 1426 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 IGKV1OR2-108A0A075B7D4 117 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 IGKV2-29A2NJV5 120 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 HEATR9A2RTY3 570 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 C9JQL5 133 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 C9JVG2 144 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ANKRD65E5RJM6 399 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 LY6LH3BQJ8 138 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 NME4O00746 187 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 HUS1O60921 280 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ANGP03950 147 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 SNRPAP09012 282 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 MYL2P10916 166 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 PTHLHP12272 177 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 IL3RAP26951 378 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ATP5IP56385 69 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 RPS15AP62244 130 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms