RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-211	ENST00000476855	RAB2B	Q8WUD1	216 aa		13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	MRPL24	Q96A35	216 aa	Known RBP	13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	MRPL37	Q9BZE1	423 aa	Known RBP	13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	LIME1	Q9H400	295 aa		13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	NDUFA13	Q9P0J0	144 aa		13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	MYEF2	Q9P2K5	600 aa	Known RBP	13.57	□□□□□ -0.24
PSMD4-211	ENST00000476855	DSCAM	O60469	2012 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	TRAV8-7	A0A075B6U6	113 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	ANKRD61	A6NGH8	418 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855		H3BMQ9	156 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	SELE	P16581	610 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	DNASE1	P24855	282 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	GCH1	P30793	250 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	NCS1	P62166	190 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	CSNK2A3	Q8NEV1	391 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	CHST5	Q9GZS9	411 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	PPP1R3E	Q9H7J1	279 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	PLEKHA1	Q9HB21	404 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	TAS2R4	Q9NYW5	299 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	POU2F3	Q9UKI9	436 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	EDAR	Q9UNE0	448 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	GSTK1	Q9Y2Q3	226 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	CMAHP	Q9Y471	501 aa		13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	NSD1	Q96L73	2696 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD4-211	ENST00000476855	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855		A0A1B0GWJ7	208 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	ZNF701	M0R085	212 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	ARL6IP5	O75915	188 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	CST4	P01036	141 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	ZNF20	P17024	532 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	CALR	P27797	417 aa	Known RBP	13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	KLF3	P57682	345 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	VBP1	P61758	197 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	HSD17B12	Q53GQ0	312 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	UTS2B	Q765I0	119 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	BIVM	Q86UB2	503 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	SERPINA12	Q8IW75	414 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR5AS1	Q8N127	324 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	BHLHE23	Q8NDY6	225 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	PP6455	Q8WZ26	134 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	PIGT	Q969N2	578 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	C12orf43	Q96C57	262 aa	Known RBP	13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	KCTD7	Q96MP8	289 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	FOXJ3	Q9UPW0	622 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	RHBDD3	Q9Y3P4	386 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	AKAP6	Q13023	2319 aa		13.55	□□□□□ -0.24
PSMD4-211	ENST00000476855	TRAV1-2	A0A0B4J238	106 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	IGKV1-9	A0A0C4DH69	117 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	TRIM64B	A6NI03	449 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	ALX3	O95076	343 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	ADRA2C	P18825	462 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	UBE2V2	Q15819	145 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	CLVS2	Q5SYC1	327 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855		Q71RC1	249 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	LRRTM1	Q86UE6	522 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR8G5	Q8NG78	346 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR51A2	Q8NGJ7	313 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	DHRS9	Q9BPW9	319 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	SYT3	Q9BQG1	590 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	SLC30A2	Q9BRI3	323 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	ZCCHC4	Q9H5U6	513 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	CISD1	Q9NZ45	108 aa	Known RBP	13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	MRPL15	Q9P015	296 aa	Known RBP	13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	RSL24D1	Q9UHA3	163 aa	Known RBP	13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	PLEKHA6	Q9Y2H5	1048 aa		13.54	□□□□□ -0.24
PSMD4-211	ENST00000476855	TIMM8A	O60220	97 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	GMDS	O60547	372 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR4A8	P0C604	315 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	SRM	P19623	302 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	APOBEC3A	P31941	199 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	GNAL	P38405	381 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	MTNR1B	P49286	362 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	EVX1	P49640	407 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	MMP15	P51511	669 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	PRDX4	Q13162	271 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	SPCS2	Q15005	226 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	EFNB3	Q15768	340 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855		Q6ZR03	302 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR1M1	Q8NGA1	313 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR5D14	Q8NGL3	314 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	OR13C9	Q8NGT0	318 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	NDNF	Q8TB73	568 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	PIGC	Q92535	297 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	GFI1	Q99684	422 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	PAPOLG	Q9BWT3	736 aa	Known RBP	13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	FAM192A	Q9GZU8	254 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	FGF23	Q9GZV9	251 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	GPR173	Q9NS66	373 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	DUSP13	Q9UII6	198 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	GPR160	Q9UJ42	338 aa		13.53	□□□□□ -0.24
PSMD4-211	ENST00000476855	CCDC160	A6NGH7	325 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	ANKRD30BL	A7E2S9	258 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	ZNF850	A8MQ14	1090 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	SLC22A1	O15245	554 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	MLNR	O43193	412 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	SULT1B1	O43704	296 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	NOL3	O60936	208 aa	Known RBP	13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	NRAS	P01111	189 aa		13.52	□□□□□ -0.25
PSMD4-211	ENST00000476855	ATF1	P18846	271 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms