RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 STUMQ69YW2 141 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 LCN8Q6JVE9 175 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 GDPGP1Q6ZNW5 385 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 DHFR2Q86XF0 187 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 TIGD4Q8IY51 512 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 CMTM4Q8IZR5 234 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 RPL3LQ92901 407 aaKnown RBP17.32■□□□□ 0.36
COL9A3-207ENST00000467819 C12orf43Q96C57 262 aaKnown RBP17.32■□□□□ 0.36
COL9A3-207ENST00000467819 ITPKCQ96DU7 683 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 RTL8AQ9BWD3 113 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 TLNRD1Q9H1K6 362 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 OR51V1Q9H2C8 321 aa17.32■□□□□ 0.36
COL9A3-207ENST00000467819 B2RBV5 119 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 TFF1P04155 84 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 FBP1P09467 338 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 PRDX4Q13162 271 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 KLRD1Q13241 179 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 TAF9Q16594 264 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 FAM98BQ52LJ0 330 aaKnown RBP17.31■□□□□ 0.36
COL9A3-207ENST00000467819 KCTD8Q6ZWB6 473 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 PIGWQ7Z7B1 504 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-207ENST00000467819 GALNT4Q8N4A0 578 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 FTMTQ8N4E7 242 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 LRTOMTQ8WZ04 291 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 DCTN5Q9BTE1 182 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 WDR13Q9H1Z4 485 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 MMP27Q9H306 513 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 HAO2Q9NYQ3 351 aa17.31■□□□□ 0.36
COL9A3-207ENST00000467819 CAB39Q9Y376 341 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-207ENST00000467819 NKX6-3A6NJ46 265 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ZNF850A8MQ14 1090 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 RNASEK-C17orf49H0YIS7 233 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ATP8B1O43520 1251 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 SELENOFO60613 162 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ACKR3P25106 362 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 TGM4P49221 684 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 MNAT1P51948 309 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 PROK1P58294 105 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 SNCBQ16143 134 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ASPHD2Q6ICH7 369 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 Q6ZSV7 163 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 Q8N7P7 452 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 THEM6Q8WUY1 208 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 UBE2FQ969M7 185 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 FEVQ99581 238 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 RBM4BQ9BQ04 359 aaKnown RBP17.3■□□□□ 0.36
COL9A3-207ENST00000467819 MUC13Q9H3R2 512 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 RGCCQ9H4X1 137 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ZNRD1Q9P1U0 126 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 ZNF391Q9UJN7 358 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 MPC1Q9Y5U8 109 aa17.3■□□□□ 0.36
COL9A3-207ENST00000467819 BTBD17A6NE02 478 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 GPR37O15354 613 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 AKR7A2O43488 359 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 CLPXO76031 633 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 LYNP07948 512 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 PAICSP22234 425 aaKnown RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 EEF1B2P24534 225 aaKnown RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 POU1F1P28069 291 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 MS4A2Q01362 244 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 TRIM25Q14258 630 aaKnown RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 DHRS7BQ6IAN0 325 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 METAP1DQ6UB28 335 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 CD300LDQ6UXZ3 194 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 ZSCAN4Q8NAM6 433 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 GIPC3Q8TF64 312 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 OR5P3Q8WZ94 311 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 PIGCQ92535 297 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 RAB3IPQ96QF0 476 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-207ENST00000467819 PKP2Q99959 881 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 TCF7L1Q9HCS4 588 aa17.29■□□□□ 0.36
COL9A3-207ENST00000467819 TMEM210A6NLX4 147 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 PRR23D1E9PI22 279 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 NPFFO15130 113 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 PRR23D2P0DMB1 279 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 GUCA2AQ02747 115 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 ATPAF1Q5TC12 328 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 PLBD1Q6P4A8 553 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 ARHGAP24Q8N264 748 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 PNKDQ8N490 385 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 OR10Z1Q8NGY1 313 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 OTOSQ8NHW6 89 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 C8orf46Q8TAG6 207 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 NPRL2Q8WTW4 380 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 RNF170Q96K19 258 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 LYZL4Q96KX0 146 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 DMRTB1Q96MA1 342 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 GAFA1Q96PS6 74 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 FGF23Q9GZV9 251 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 SLC25A10Q9UBX3 287 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 VPREB3Q9UKI3 123 aa17.28■□□□□ 0.36
COL9A3-207ENST00000467819 TET2Q6N021 2002 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-207ENST00000467819 NDUFB7P17568 137 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 DGUOKQ16854 277 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 ZNF788Q6ZQV5 615 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 OR8B12Q8NGG6 310 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 HPSE2Q8WWQ2 592 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 DNTTIP1Q9H147 329 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms