RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZNF705EA8MWA4 302 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MKRN2OSH3BPM6 223 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 GFYI3L273 518 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 M0R129 80 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 RTCAO00442 366 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR7A17O14581 309 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 P2RX6O15547 441 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 VEGFDO43915 354 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 GATBO75879 557 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZFAND5O76080 213 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 APBB3O95704 486 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 IGHV2-5P01817 119 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 SFTA3P0C7M3 94 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 RNF224P0DH78 156 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 COX5BP10606 129 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC25A4P12235 298 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MUC1P15941 1255 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CELP19835 753 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 RAB5AP20339 215 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 DRD5P21918 477 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MT3P25713 68 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 HMGB2P26583 209 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 AQP1P29972 269 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PRDX3P30048 256 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MAT2AP31153 395 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CEACAM6P40199 344 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PTGER3P43115 390 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 HTR5AP47898 357 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC6A12P48065 614 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CCR8P51685 355 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PRKXP51817 358 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 SUCLG1P53597 346 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CRISP3P54108 245 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 UCP2P55851 309 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 NUTF2P61970 127 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACTA2P62736 377 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACTG2P63267 376 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 BCL2L1Q07817 233 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PJVKQ0ZLH3 352 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CNTN1Q12860 1018 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF177Q13360 481 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 KIAA0141Q14154 515 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 GANABQ14697 944 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 IRF4Q15306 451 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 RGNQ15493 299 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 VWA2Q5GFL6 755 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM69Q5SWH9 247 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MARCH8Q5T0T0 291 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ARMC12Q5T9G4 340 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CPTPQ5TA50 214 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM244Q5VVB8 128 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 LYPLAL1Q5VWZ2 237 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PLPP4Q5VZY2 271 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZCCHC12Q6PEW1 402 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 DRAM2Q6UX65 266 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 VITQ6UXI7 678 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CERS6Q6ZMG9 384 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 Q6ZRP5 223 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 Q6ZTC4 211 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACOT7LQ6ZUV0 252 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF546Q86UE3 836 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CATSPERDQ86XM0 798 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 KRTCAP2Q8N6L1 136 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MFSD9Q8NBP5 474 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 HSD17B11Q8NBQ5 300 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR7G2Q8NG99 324 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR11G2Q8NGC1 345 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR5T3Q8NGG3 340 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR52L1Q8NGH7 329 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR13C5Q8NGS8 318 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR13D1Q8NGV5 346 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR2L8Q8NGY9 312 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR52J3Q8NH60 311 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CD99L2Q8TCZ2 262 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 CD200R1Q8TD46 325 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 HAVCR2Q8TDQ0 301 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 HIST1H2BAQ96A08 127 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 BPIFA2Q96DR5 249 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MED8Q96G25 268 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 C14orf144Q96I85 54 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZFP3Q96NJ6 502 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 WFIKKN1Q96NZ8 548 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 NRIP2Q9BQI9 281 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ACBD6Q9BR61 282 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 NDUFAF3Q9BU61 184 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 WRAP53Q9BUR4 548 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 PBDC1Q9BVG4 233 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MRPL37Q9BZE1 423 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 EGLN1Q9GZT9 426 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLITRK2Q9H156 845 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 OPN3Q9H1Y3 402 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MTIF3Q9H2K0 278 aaKnown RBP3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 GAL3ST2Q9H3Q3 398 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 RGCCQ9H4X1 137 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZDHHC6Q9H6R6 413 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM185BQ9H7F4 350 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 MED20Q9H944 212 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM27Q9HBJ8 222 aa3.73□□□□□ -1.81
HMGB1P16-201ENST00000447155 NT5MQ9NPB1 228 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms