RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SPSB1Q96BD6 273 aa15.16■□□□□ 0.02
SMARCA4-203ENST00000429416 PINX1Q96BK5 328 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-203ENST00000429416 ZNF385DQ9H6B1 395 aa15.16■□□□□ 0.02
SMARCA4-203ENST00000429416 COPS3Q9UNS2 423 aa15.16■□□□□ 0.02
SMARCA4-203ENST00000429416 LRP5LA4QPB2 252 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CD1EP15812 388 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 BAXQ07812 192 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 FYTTD1Q96QD9 318 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CCL27Q9Y4X3 112 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 A0A0B4J203 849 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 TMEM30CPA0ZSE6 113 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 IGKV1D-16P01601 117 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 PRF1P14222 555 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 TSPO2Q5TGU0 170 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CDC20BQ86Y33 519 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 OR10A3P58181 314 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 WDR38Q5JTN6 314 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 MOGAT3Q86VF5 341 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 TMEM217Q8N7C4 229 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 TTC28Q96AY4 2481 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 I3L521 148 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CDCA4Q9BXL8 241 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CXXC4Q9H2H0 198 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 A0A1B0GUH1 482 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 SIAH3Q8IW03 269 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 C17orf78Q8N4C9 275 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 OR13F1Q8NGS4 319 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 GIMAP1Q8WWP7 306 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 SEH1LQ96EE3 360 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 CHST6Q9GZX3 395 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 TAS2R5Q9NYW4 299 aa15.15■□□□□ 0.02
SMARCA4-203ENST00000429416 NGFP01138 241 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CT45A6P0DMU7 189 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CT45A5P0DMU8 189 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CT45A7P0DMV0 189 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CT45A1Q5HYN5 189 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 FAM58AQ8N1B3 248 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CT45A3Q8NHU0 189 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CACNA1IQ9P0X4 2223 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 TSPAN15O95858 294 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 DYRK1AQ13627 763 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 SNTB1Q13884 538 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 LY6DQ14210 128 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 GGTLC2Q14390 218 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 ZNF626Q68DY1 528 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 TRAV38-1A0A0B4J264 116 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 ANKRD33BA6NCL7 494 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CD59P13987 128 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 KRBOX4Q5JUW0 171 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 ZNF574Q6ZN55 896 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 NOXA1Q86UR1 476 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 MDP1Q86V88 176 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 LGI3Q8N145 548 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 OR8B3Q8NGG8 313 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 PTP4A1Q93096 173 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 OR8B2Q96RD0 313 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CYSLTR2Q9NS75 346 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 DEFB108AA8MXU0 73 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 OR8U8P0C7N1 319 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 FAM27D1Q5T7N8 215 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 INO80CQ6PI98 192 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 CLEC2AQ6UVW9 174 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 C20orf196Q8IYI0 205 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 PBDC1Q9BVG4 233 aa15.14■□□□□ 0.01
SMARCA4-203ENST00000429416 FCGR2CP31995 323 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 IAH1Q2TAA2 248 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 OR8G2PQ6IF36 304 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 LSMEM1Q8N8F7 131 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 WDSUB1Q8N9V3 476 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 PPIL3Q9H2H8 161 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 MSL2Q9HCI7 577 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 PLCXD1Q9NUJ7 323 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 UBQLN2Q9UHD9 624 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 COL6A6A6NMZ7 2263 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 CENPVL1A0A0U1RR11 272 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 CTSSP25774 331 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 PDZD9Q8IXQ8 264 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 OR51S1Q8NGJ8 323 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 RAB4BP61018 213 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 CREB3L2Q70SY1 520 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 IFITM5A6NNB3 132 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 K7EPK0 472 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 AGPAT2O15120 278 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 IGHV3-13P01766 116 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 IGHV3-7P01780 117 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 FABP5Q01469 135 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 KISS1Q15726 138 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 FAM71E2Q8N5Q1 922 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 BORCS7Q96B45 105 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 RHNO1Q9BSD3 238 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 RTTNQ86VV8 2226 aa15.13■□□□□ 0.01
SMARCA4-203ENST00000429416 A0A0U1RQK1 487 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 TFAP2AP05549 437 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 HBG1P69891 147 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 HBG2P69892 147 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 PAQR8Q8TEZ7 354 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 SERTAD4Q9NUC0 356 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 OR5V1Q9UGF6 321 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 HLA-DOBP13765 273 aa15.12■□□□□ 0.01
SMARCA4-203ENST00000429416 NUDT19A8MXV4 375 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms