RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 C1orf50Q9BV19 199 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 TPPP3Q9BW30 176 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 SFXN3Q9BWM7 321 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 PARD6GQ9BYG4 376 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 REG4Q9BYZ8 158 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 GOLPH3Q9H4A6 298 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 HMG20AQ9NP66 347 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 B3GNT2Q9NY97 397 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 EIF3KQ9UBQ5 218 aaKnown RBP3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 KLK11Q9UBX7 282 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 TAC3Q9UHF0 121 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 CLEC2DQ9UHP7 191 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 BOKQ9UMX3 212 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 GUCA1BQ9UMX6 200 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 VSIG4Q9Y279 399 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 NDUFAF1Q9Y375 327 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 LIPGQ9Y5X9 500 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 KIAA1549Q9HCM3 1950 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 SVEP1Q4LDE5 3571 aa3.63□□□□□ -1.83
HMGB3P5-201ENST00000428894 MED12LQ86YW9 2145 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 FREM1Q5H8C1 2179 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CR1P17927 2039 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 A0A087X0T9 212 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 TRAV34A0A0B4J273 112 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PINLYPA6NC86 204 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ANKDD1BA6NHY2 528 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 A8MUA0 341 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 F8VVB4 439 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 F8VWA3 439 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 G3V2T6 193 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 H7C2Y5 167 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 M0QZK8 103 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CHST10O43529 356 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RDH16O75452 317 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 STX11O75558 287 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 GATBO75879 557 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR6B1O95007 311 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ANGPTL1O95841 491 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 GOT2P00505 430 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERPINA3P01011 423 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERPINA5P05154 406 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RNH1P13489 461 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ETS1P14921 441 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 UQCRBP14927 111 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 C4BPBP20851 252 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CRYGSP22914 178 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 DTYMKP23919 212 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSMB4P28070 264 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 HSD11B1P28845 292 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 LCN1P31025 176 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 TGFBR2P37173 567 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CDKN2BP42772 138 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 BDKRB1P46663 353 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RAD23AP54725 363 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NAGLUP54802 743 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RGS8P57771 180 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ERVK-25P63136 954 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MYL5Q02045 173 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RGS1Q08116 209 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 LCP2Q13094 533 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLAQ13239 276 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SCGB2A2Q13296 93 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 HEPACAMQ14CZ8 416 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OXA1LQ15070 435 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CLEC12BQ2HXU8 276 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC36A3Q495N2 470 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ACSF3Q4G176 576 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NHSL2Q5HYW2 709 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 C9orf152Q5JTZ5 239 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 LIPJQ5W064 366 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CYB5R2Q6BCY4 276 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CAPN13Q6MZZ7 669 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF544Q6NX49 715 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 TTC27Q6P3X3 843 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MFSD7Q6UXD7 560 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 BAIAP2L2Q6UXY1 529 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 HSDL2Q6YN16 418 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PGAP1Q75T13 922 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ASRGL1Q7L266 308 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 GDPD3Q7L5L3 318 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PRSS41Q7RTY9 318 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CROCCP2Q86T23 111 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MISPQ8IVT2 679 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 KLHL7Q8IXQ5 586 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 DND1Q8IYX4 353 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SELENOHQ8IZQ5 122 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CADM2Q8N3J6 435 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 STX19Q8N4C7 294 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR7G3Q8NG95 312 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR9Q2Q8NGE9 314 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SGMS2Q8NHU3 365 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NDNFQ8TB73 568 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SETD6Q8TBK2 473 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 S100ZQ8WXG8 99 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZMYND19Q96E35 227 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZBED6CLQ96FA7 236 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PIK3IP1Q96FE7 263 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NARS2Q96I59 477 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF317Q96PQ6 595 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms