RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRAMEF27A3QJZ7 478 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ANKUB1A6NFN9 424 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 C9JQL5 133 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 K7N7A8 449 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 LEFTY2O00292 366 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PIN1P1O15428 100 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SOX15O60248 233 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRAMEF4O60810 478 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CTSVO60911 334 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PITX3O75364 302 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 VENTXO95231 258 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC2A10O95528 541 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ETHE1O95571 254 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SNAI1O95863 264 aaPredicted RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 HRASP01112 189 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 MAS1P04201 325 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SRP19P09132 144 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CXCL1P09341 107 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR5G3P0C626 314 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZGLP1P0C6A0 271 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PGA4P0DJD7 388 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PGA5P0DJD9 388 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 MMP9P14780 707 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 HMGA1P17096 107 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ADRA2CP18825 462 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 LMO1P25800 156 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 MPLP40238 635 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAB28P51157 221 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 HNRNPA3P51991 378 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PDX1P52945 283 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDN6P56747 220 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SNRPD1P62314 119 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TBPL1P62380 186 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 RPS26P62854 115 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 EIF2B1Q14232 305 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ENDOGQ14249 297 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 NR0B2Q15466 257 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 RNF151Q2KHN1 245 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TCTN1Q2MV58 587 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 FBLN7Q53RD9 439 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ACTL10Q5JWF8 245 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRAMEF14Q5SWL7 426 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRAMEF9Q5VWM5 478 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TEX38Q6PEX7 206 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 LBX2Q6XYB7 198 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMPPEQ6ZT21 453 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ERN2Q76MJ5 926 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TCF24Q7RTU0 167 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 C5orf24Q7Z6I8 188 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 AMZ2Q86W34 360 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAM129CQ86XR2 697 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 WDFY1Q8IWB7 410 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF619Q8N2I2 560 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 AMER3Q8N944 861 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 APCDD1LQ8NCL9 501 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR13C9Q8NGT0 318 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR6K6Q8NGW6 343 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4X1Q8NH49 305 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ABHD5Q8WTS1 349 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 DVL3Q92997 716 aaPredicted RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CTHRC1Q96CG8 243 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZG16BQ96DA0 208 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 GNRHR2Q96P88 292 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR8B4Q96RC9 309 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TBX15Q96SF7 602 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 DIRC2Q96SL1 478 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 GFI1Q99684 422 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TXN2Q99757 166 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CMKLR1Q99788 373 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 NUDT9Q9BW91 350 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 HDAC8Q9BY41 377 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR51I2Q9H344 312 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPR35Q9HC97 309 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 Q9N2J8 555 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 SIRT3Q9NTG7 399 aaPredicted RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDND1Q9NY35 253 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 CISD1Q9NZ45 108 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 AK3Q9UIJ7 227 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 TBX21Q9UL17 535 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 ST3GAL6Q9Y274 331 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 B3GALT5Q9Y2C3 310 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRPS16Q9Y3D3 137 aaKnown RBP5□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRSS21Q9Y6M0 314 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 COLEC10Q9Y6Z7 277 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 URGCP-MRPS24S4R325 110 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 DOCK4Q8N1I0 1966 aa5□□□□□ -1.61
VTI1BP4-201ENST00000427516 LCTP09848 1927 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NSG1A0A0A6YYJ2 146 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 DUXBA0A1W2PPF3 345 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF860A6NHJ4 632 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 AHRRA9YTQ3 701 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 C9orf172C9J069 976 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NPIPA7E9PJI5 369 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 H0Y8G0 127 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ST8SIA3O43173 380 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NDUFS4O43181 175 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRAF3IP2O43734 574 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 FCMRO60667 390 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms