RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 HEXBP07686 556 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 QDPRP09417 244 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 MUC1P15941 1255 aaPredicted RBP7.66□□□□□ -1.18
USP40-203ENST00000427112 MRPS10P82664 201 aaKnown RBP7.66□□□□□ -1.18
USP40-203ENST00000427112 EGR3Q06889 387 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 SGCBQ16585 318 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 OR5AP2Q8NGF4 316 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 OR10S1Q8NGN2 331 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 ADIPOR1Q96A54 375 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 HMSDA8MTL9 139 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 CCL2P13500 99 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 TUBG1P23258 451 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 CD38P28907 300 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 POLR2HP52434 150 aaKnown RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 ACY1Q03154 408 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 IAH1Q2TAA2 248 aaPredicted RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 EIF2S3LQ2VIR3 472 aaKnown RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 PGAP1Q75T13 922 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 RAB11FIP2Q7L804 512 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 OR8B12Q8NGG6 310 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 OR10Z1Q8NGY1 313 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 SLC46A1Q96NT5 459 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 OR6C1Q96RD1 312 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 BCL2L14Q9BZR8 327 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 ZFP57Q9NU63 452 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 LOC102724200A0A096LPH7 203 aaPredicted RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 TMEM218A2RU14 115 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 ZBTB25P24278 435 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 LPAR6P43657 344 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 PNLIPRP2P54317 469 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 RPS27AP62979 156 aaKnown RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 UBA52P62987 128 aaKnown RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 FLI1Q01543 452 aaPredicted RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 CLEC12BQ2HXU8 276 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 HFEQ30201 348 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 CHRFAM7AQ494W8 412 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 PHF19Q5T6S3 580 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 C1orf53Q5VUE5 145 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 OR4A4PQ8NGN8 299 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 RXFP4Q8TDU9 374 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 SLC25A43Q8WUT9 341 aaPredicted RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 DAZLQ92904 295 aaKnown RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 FAAP24Q9BTP7 215 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 C5orf66Q9H5L9 145 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 CHST11Q9NPF2 352 aa7.65□□□□□ -1.18
USP40-203ENST00000427112 ZNF629Q9UEG4 869 aaPredicted RBP7.65□□□□□ -1.18
USP40-203ENST00000427112 ZNF850A8MQ14 1090 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 OR8U9P0C7N5 309 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 NME1P15531 152 aaKnown RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 NQO2P16083 231 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 CSRP1P21291 193 aaKnown RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 MDKP21741 143 aaPredicted RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 CPT2P23786 658 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 TMEM50BP56557 158 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 RPS16P62249 146 aaKnown RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 RNF4P78317 190 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 ZNF260Q3ZCT1 412 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 OVCH2Q7RTZ1 564 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 LRP11Q86VZ4 500 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 TMEM217Q8N7C4 229 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 OR14K1Q8NGZ2 314 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 OR8U1Q8NH10 309 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 CLCC1Q96S66 551 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 LAT2Q9GZY6 243 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 ZNF275Q9NSD4 429 aaPredicted RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 DMXL2Q8TDJ6 3036 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 GTF3C1Q12789 2109 aa7.65□□□□□ -1.19
USP40-203ENST00000427112 HEATR1Q9H583 2144 aaKnown RBP7.65□□□□□ -1.19
USP40-203ENST00000427112 TRAV39A0A0B4J263 110 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 A0A1W2PPC4 97 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 S100A7P31151 101 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 RPS10P46783 165 aaKnown RBP7.64□□□□□ -1.19
USP40-203ENST00000427112 CX3CR1P49238 355 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 COL19A1Q14993 1142 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 FNDC7Q5VTL7 733 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 RAET1LQ5VY80 246 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 FBXO46Q6PJ61 603 aaPredicted RBP7.64□□□□□ -1.19
USP40-203ENST00000427112 OGFOD3Q6PK18 319 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 BAP18Q8IXM2 172 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 TMEM229BQ8NBD8 167 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 OR5D14Q8NGL3 314 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 OR11L1Q8NGX0 322 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 IP6K3Q96PC2 410 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 DNTTIP1Q9H147 329 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 SERINC1Q9NRX5 453 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 CBY1Q9Y3M2 126 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 VSTM2BA6NLU5 285 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 ZNF726A6NNF4 738 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 H3BP45 60 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 TNFRSF10CO14798 259 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 SOX15O60248 233 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 CRHP06850 196 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 FBP1P09467 338 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 BLKP51451 505 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP40-203ENST00000427112 Q6ZRG5 221 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 H1FNTQ75WM6 255 aaPredicted RBP7.64□□□□□ -1.19
USP40-203ENST00000427112 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
USP40-203ENST00000427112 PRRT1Q99946 306 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms