RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 Q6YL49 198 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 BTN2A1Q7KYR7 527 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 CSNK2A3Q8NEV1 391 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 OR5K1Q8NHB7 308 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 OTOSQ8NHW6 89 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 THEM6Q8WUY1 208 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 LRRC29Q8WV35 223 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
NUP50-205ENST00000419387 RAB3IPQ96QF0 476 aaPredicted RBP7.81□□□□□ -1.16
NUP50-205ENST00000419387 TBX15Q96SF7 602 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 MICU1Q9BPX6 476 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 SEMA6AQ9H2E6 1030 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 RGCCQ9H4X1 137 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 PPP1R3EQ9H7J1 279 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 ZNF696Q9H7X3 374 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 YY1AP1Q9H869 796 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 ZNF556Q9HAH1 456 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 S100A14Q9HCY8 104 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 NOX4Q9NPH5 578 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 RHBDD3Q9Y3P4 386 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 MPC1Q9Y5U8 109 aa7.81□□□□□ -1.16
NUP50-205ENST00000419387 ANXA2P2A6NMY6 339 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SRRM5B3KS81 715 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 G3V2T6 193 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 CDIPTO14735 213 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 PRODHO43272 600 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SELENOFO60613 162 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 MITFO75030 526 aaPredicted RBP7.8□□□□□ -1.16
NUP50-205ENST00000419387 FCN3O75636 299 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 ANXA8P13928 327 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 POLR2IP36954 125 aaKnown RBP7.8□□□□□ -1.16
NUP50-205ENST00000419387 ARF6P62330 175 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 CSNK2BP67870 215 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 IL5RAQ01344 420 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SLC35D3Q5M8T2 416 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 PRR31Q5SQ13 230 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 RUSC1-AS1Q66K80 236 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 ZFP1Q6P2D0 407 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 CPOQ8IVL8 374 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 GALNT4Q8N4A0 578 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 FTMTQ8N4E7 242 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 TMEM86BQ8N661 226 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 ST8SIA4Q92187 359 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 TAF15Q92804 592 aaKnown RBP eCLIP7.8□□□□□ -1.16
NUP50-205ENST00000419387 TMIGD2Q96BF3 282 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 ITPKCQ96DU7 683 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 FAM71F1Q96KD3 344 aaPredicted RBP7.8□□□□□ -1.16
NUP50-205ENST00000419387 CCL13Q99616 98 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SLC29A1Q99808 456 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 PAPOLGQ9BWT3 736 aaKnown RBP7.8□□□□□ -1.16
NUP50-205ENST00000419387 OSBPL10Q9BXB5 764 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 GABARAPL1Q9H0R8 117 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SIRPDQ9H106 197 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 SLITRK2Q9H156 845 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 TLNRD1Q9H1K6 362 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 NIPAL2Q9H841 368 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 CNTD2Q9H8S5 307 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 OAZ3Q9UMX2 235 aa7.8□□□□□ -1.16
NUP50-205ENST00000419387 IGHV1-69DA0A0B4J2H0 117 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 A0A1B0GUS0 222 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 ZNF850A8MQ14 1090 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 DLGAP1O14490 977 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 E2F6O75461 281 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 CST4P01036 141 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 CRYBA1P05813 215 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 MELTFP08582 738 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 MDKP21741 143 aaPredicted RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 SLC2A5P22732 501 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 OMGP23515 440 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 ACKR3P25106 362 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 RPS7P62081 194 aaKnown RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 ELF3P78545 371 aaPredicted RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 PRDX4Q13162 271 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 WDR38Q5JTN6 314 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 ATPAF1Q5TC12 328 aaPredicted RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 TMEM236Q5W0B7 351 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 FIP1L1Q6UN15 594 aaKnown RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 SLC36A1Q7Z2H8 476 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 LY6G5BQ8NDX9 201 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 OR10Z1Q8NGY1 313 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 OR5P3Q8WZ94 311 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 PIGCQ92535 297 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 LHX4Q969G2 390 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 C12orf43Q96C57 262 aaKnown RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 SEH1LQ96EE3 360 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 LYZL4Q96KX0 146 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 DMRTB1Q96MA1 342 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 RTL8AQ9BWD3 113 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 TEX12Q9BXU0 123 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 ABCB9Q9NP78 766 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 ACOXLQ9NUZ1 547 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 HAO2Q9NYQ3 351 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 RPUSD1Q9UJJ7 312 aaKnown RBP7.79□□□□□ -1.16
NUP50-205ENST00000419387 ZNF391Q9UJN7 358 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 LAMP5Q9UJQ1 280 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 MMP24Q9Y5R2 645 aa7.79□□□□□ -1.16
NUP50-205ENST00000419387 KPTNQ9Y664 436 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms