RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MEPCEQ7L2J0 689 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 C22orf15Q8WYQ4 148 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 TECTBQ96PL2 329 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 NOX4Q9NPH5 578 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 BRD7Q9NPI1 651 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 KRT84Q9NSB2 600 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 HAO2Q9NYQ3 351 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 CDIPTO14735 213 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 TMPRSS2O15393 492 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 MTRF1O75570 445 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 RNASE1P07998 156 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 HKR1P10072 659 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 ANOS1P23352 680 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 GFOD2Q3B7J2 385 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF829Q3KNS6 432 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 WDR82Q6UXN9 313 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF826PQ6ZT77 177 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 FAM90A1Q86YD7 464 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 SGMS2Q8NHU3 365 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 MED30Q96HR3 178 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
NIF3L1-205ENST00000409588 ANK2Q01484 3957 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF816-ZNF321PA0A0X1KG74 233 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 DVL1O14640 695 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 TOX4O94842 621 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 GYPAP02724 150 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 RIDAP52758 137 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 FGF12P61328 243 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 RIPPLY1Q0D2K3 151 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 PRDX4Q13162 271 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 C1orf146Q5VVC0 180 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 SLX4IPQ5VYV7 408 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 GID4Q8IVV7 300 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 C10orf67Q8IYJ2 551 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 C19orf18Q8NEA5 215 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 BBS1Q8NFJ9 593 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 OR5A2Q8NGI9 324 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF671Q8TAW3 534 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 FAM81AQ8TBF8 368 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 TMEM163Q8TC26 289 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 NPRL2Q8WTW4 380 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 PIGCQ92535 297 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 RNF170Q96K19 258 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 WDFY2Q96P53 400 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 OR8B4Q96RC9 309 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 CNN2Q99439 309 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 MOB1AQ9H8S9 216 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 KPTNQ9Y664 436 aa12.06□□□□□ -0.48
NIF3L1-205ENST00000409588 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF850A8MQ14 1090 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 C22orf46C9J442 243 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 NDUFB3O43676 98 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 TGM4P49221 684 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 GNG3P63215 75 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 EGR3Q06889 387 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 POU4F2Q12837 409 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 TMED1Q13445 227 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 AADACL4Q5VUY2 407 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 C1orf122Q6ZSJ8 110 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 BTN2A1Q7KYR7 527 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 THAP5Q7Z6K1 395 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 BCL6BQ8N143 479 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 TMEM86BQ8N661 226 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 OR8B12Q8NGG6 310 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 PKP2Q99959 881 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 PBOV1Q9GZY1 135 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 RASL12Q9NYN1 266 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 CTSZQ9UBR2 303 aa12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 NUFIP1Q9UHK0 495 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-205ENST00000409588 TRAV40A0A0B4J280 105 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 DHRS7CA6NNS2 312 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 PRKYO43930 277 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 CIB2O75838 187 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 ACKR3P25106 362 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 RPL15P61313 204 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 IL13RA1P78552 427 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 CDONQ4KMG0 1287 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 C12orf73Q69YU5 71 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms