RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZNF485Q8NCK3 441 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 OR5AK2Q8NH90 309 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 HIST1H2AAQ96QV6 131 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 MICU1Q9BPX6 476 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 COMMD4Q9H0A8 199 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 PLEKHA1Q9HB21 404 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 TRIM36Q9NQ86 728 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 HHLA2Q9UM44 414 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 HIVEP1P15822 2718 aa16.23■□□□□ 0.19
HOXA9-202ENST00000396345 LOC100289279A0A1B0GTE1 492 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 A6NIN4 97 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 CLDN25C9JDP6 229 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 RPSAP08865 295 aaKnown RBP16.22■□□□□ 0.19
HOXA9-202ENST00000396345 GPR6P46095 362 aaPredicted RBP16.22■□□□□ 0.19
HOXA9-202ENST00000396345 WNT4P56705 351 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 SLC3A1Q07837 685 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 CDK5R1Q15078 307 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 CLVS2Q5SYC1 327 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 XAF1Q6GPH4 301 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 MOB3CQ70IA8 216 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 OR5P3Q8WZ94 311 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 ERGIC1Q969X5 290 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 ITPKCQ96DU7 683 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 PDCD1LG2Q9BQ51 273 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 MND1Q9BWT6 205 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 BPESC1Q9GZL8 116 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 TMEM106BQ9NUM4 274 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 UFSP2Q9NUQ7 469 aa16.22■□□□□ 0.19
HOXA9-202ENST00000396345 IFNL4K9M1U5 179 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 OGG1O15527 345 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 LMX1BO60663 402 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 ZFPL1O95159 310 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 PTBP3O95758 552 aaKnown RBP16.21■□□□□ 0.19
HOXA9-202ENST00000396345 LALBAP00709 142 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 NRASP01111 189 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 MT-ND2P03891 347 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 GRPP07492 148 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 CD99P14209 185 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 EEF1B2P24534 225 aaKnown RBP16.21■□□□□ 0.19
HOXA9-202ENST00000396345 CDH15P55291 814 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 HNRNPA0Q13151 305 aaKnown RBP16.21■□□□□ 0.19
HOXA9-202ENST00000396345 CEP78Q5JTW2 689 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 TMEM42Q69YG0 159 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 ZNF420Q8TAQ5 688 aaPredicted RBP16.21■□□□□ 0.19
HOXA9-202ENST00000396345 RNF170Q96K19 258 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 TMUB1Q9BVT8 246 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 RTL8AQ9BWD3 113 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 CCDC90BQ9GZT6 254 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 FN3KRPQ9HA64 309 aa16.21■□□□□ 0.19
HOXA9-202ENST00000396345 SIRT4Q9Y6E7 314 aaPredicted RBP16.21■□□□□ 0.19
HOXA9-202ENST00000396345 SMAD7O15105 426 aaKnown RBP16.2■□□□□ 0.18
HOXA9-202ENST00000396345 RBMXP38159 391 aaKnown RBP16.2■□□□□ 0.18
HOXA9-202ENST00000396345 PMELP40967 661 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 TAS2R43P59537 309 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 IRF3Q14653 427 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 MPPED2Q15777 294 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 CEACAM21Q3KPI0 293 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 PLCXD3Q63HM9 321 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 KCTD8Q6ZWB6 473 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 PRSS48Q7RTY5 328 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 CIARTQ8N365 385 aaPredicted RBP16.2■□□□□ 0.18
HOXA9-202ENST00000396345 OR51A4Q8NGJ6 313 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 OR13C3Q8NGS6 347 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 OR11L1Q8NGX0 322 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 OR10AC1Q8NH08 325 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 RPS4Y2Q8TD47 263 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 HPSE2Q8WWQ2 592 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 C10orf35Q96D05 121 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 TIMD4Q96H15 378 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 GPR173Q9NS66 373 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 DCAF16Q9NXF7 216 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 ACANP16112 2415 aa16.2■□□□□ 0.18
HOXA9-202ENST00000396345 LRRC30A6NM36 301 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 ZNF20P17024 532 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 USF1P22415 310 aaPredicted RBP16.19■□□□□ 0.18
HOXA9-202ENST00000396345 THBS2P35442 1172 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 DMRTC1Q5HYR2 192 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 AVPI1Q5T686 147 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 PEG10Q86TG7 708 aaKnown RBP16.19■□□□□ 0.18
HOXA9-202ENST00000396345 WDR86Q86TI4 376 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 ZFP41Q8N8Y5 198 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 MAPK1IP1LQ8NDC0 245 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 OR1M1Q8NGA1 313 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 OR5A2Q8NGI9 324 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 Q8TCH9 128 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 HPS1Q92902 700 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 RAB1CQ92928 201 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 FGGYQ96C11 551 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 SMIM19Q96E16 107 aa16.19■□□□□ 0.18
HOXA9-202ENST00000396345 YTHDF1Q9BYJ9 559 aaKnown RBP16.19■□□□□ 0.18
HOXA9-202ENST00000396345 FGF23Q9GZV9 251 aaPredicted RBP16.19■□□□□ 0.18
HOXA9-202ENST00000396345 A0A096LNT2 108 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 IGHV4-61A0A0C4DH41 118 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 ANKRD61A6NGH8 418 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 A6NLC8 198 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 TMEM210A6NLX4 147 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 TMEM178BH3BS89 294 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
HOXA9-202ENST00000396345 SERPINA3P01011 423 aa16.18■□□□□ 0.18
HOXA9-202ENST00000396345 IRF2P14316 349 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms