RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 HCKP08631 526 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 CTLA4P16410 223 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 PTGER4P35408 488 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 PPM1AP35813 382 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 APOBEC1P41238 236 aaKnown RBP14.33□□□□□ -0.11
CHD1L-203ENST00000369259 DHPSP49366 369 aaPredicted RBP14.33□□□□□ -0.11
CHD1L-203ENST00000369259 C1orf140Q5VVS0 124 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 FIGLAQ6QHK4 219 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 NUP54Q7Z3B4 507 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 APCDD1LQ8NCL9 501 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 FLVCR1-AS1Q8TAF5 88 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 NSG2Q9Y328 171 aa14.33□□□□□ -0.11
CHD1L-203ENST00000369259 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 H0YGG7 62 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 SDCBPO00560 298 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-203ENST00000369259 TNFSF14O43557 240 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 RAD51DO75771 328 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 APBB3O95704 486 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 QDPRP09417 244 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 CT45A8P0DMV1 189 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 CT45A9P0DMV2 189 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 MYOGP15173 224 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 ARF3P61204 181 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-203ENST00000369259 ERV3-1Q14264 604 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 JOSD1Q15040 202 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-203ENST00000369259 CD226Q15762 336 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 CT45A2Q5DJT8 189 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 CYB5R2Q6BCY4 276 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 RERGQ96A58 199 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-203ENST00000369259 SRPK3Q9UPE1 567 aa14.33□□□□□ -0.12
CHD1L-203ENST00000369259 C14orf166Q9Y224 244 aaKnown RBP14.33□□□□□ -0.12
CHD1L-203ENST00000369259 TRPM6Q9BX84 2022 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 GPR137BO60478 399 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 CTNNB1P35222 781 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 GLIPR1P48060 266 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 RPL27P61353 136 aaKnown RBP14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ACKR1Q16570 336 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 CBLN3Q6UW01 205 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 DEFB128Q7Z7B8 93 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 HSD17B11Q8NBQ5 300 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF524Q96C55 264 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 POM121Q96HA1 1249 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 METTL9Q9H1A3 318 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 VSX1Q9NZR4 365 aaPredicted RBP14.32□□□□□ -0.12
CHD1L-203ENST00000369259 A0A087WZY1 265 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 H0YL77 283 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 K7N7A8 449 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 DVL1O14640 695 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 TNFRSF9Q07011 255 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 TMEM182Q6ZP80 229 aaPredicted RBP14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF429Q86V71 674 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF664Q8N3J9 261 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF519Q8TB69 540 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 DNAJA3Q96EY1 480 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 ADAT3Q96EY9 351 aaPredicted RBP14.32□□□□□ -0.12
CHD1L-203ENST00000369259 EHFQ9NZC4 300 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 SLC17A4Q9Y2C5 497 aa14.32□□□□□ -0.12
CHD1L-203ENST00000369259 SOX1O00570 391 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 MPZL1O95297 269 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 MPIG6BO95866 241 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 KLK2P20151 261 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 TMEM50BP56557 158 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 RAB38P57729 211 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 HAGHQ16775 308 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 GPR157Q5UAW9 335 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 PLXDC2Q6UX71 529 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 SGPP2Q8IWX5 399 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 MRPL24Q96A35 216 aaKnown RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 TVP23CQ96ET8 276 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ZFYVE21Q9BQ24 234 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ST6GALNAC5Q9BVH7 336 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 TCFL5Q9UL49 500 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ARID1AO14497 2285 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 BGLAPP02818 100 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 SRP19P09132 144 aaKnown RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 OR5H8P0DN80 308 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 GZMBP10144 247 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF93P35789 620 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 CEBPGP53567 150 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 TAS2R46P59540 309 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 CSNK2A1P68400 391 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 CCL20P78556 96 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 ARFRP1Q13795 201 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 KIR2DS3Q14952 304 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHD1L-203ENST00000369259 FNDC7Q5VTL7 733 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 GLIPR1L1Q6UWM5 242 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 GALNTL5Q7Z4T8 443 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 C5orf24Q7Z6I8 188 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 CSNK2A3Q8NEV1 391 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 OR5D14Q8NGL3 314 aa14.31□□□□□ -0.12
CHD1L-203ENST00000369259 COL4A2P08572 1712 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 CCDC187A0A096LP49 1063 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 TGOLN2O43493 480 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 CYTIPO60759 359 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 MBPP02686 304 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 DRD3P35462 400 aa14.3□□□□□ -0.12
CHD1L-203ENST00000369259 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-203ENST00000369259 GLO1Q04760 184 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms