RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZMYND11Q15326 602 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 FBXO48Q5FWF7 155 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR2B11Q5JQS5 317 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR4F3Q6IEY1 312 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC35F2Q8IXU6 374 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 LRRC75A-AS1Q8N1F1 130 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR8K3Q8NH51 312 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 ANKRD49Q8WVL7 239 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC25A38Q96DW6 304 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 WFIKKN1Q96NZ8 548 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 SERPINB12Q96P63 405 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 IL4I1Q96RQ9 567 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 MAPKAP1Q9BPZ7 522 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 UGT2B28Q9BY64 529 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 TSGA10Q9BZW7 698 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC7A10Q9NS82 523 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 NUDT15Q9NV35 164 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 DNAJC13O75165 2243 aa4.11□□□□□ -1.75
RNU4-39P-201ENST00000362455 EEF1E1-BLOC1S5C9J1V9 151 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 E7ESA3 106 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 AP3B1O00203 1094 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 PFDN6O15212 129 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 EEF1E1O43324 174 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CXCL13O43927 109 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 TNFSF13O75888 250 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGHG4P01861 327 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 FGGP02679 453 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 IFNA16P05015 189 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 HPNP05981 417 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 C1GALT1C1LP0DN25 315 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 MLNP12872 115 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 POU2F1P14859 743 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGLL1P15814 213 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 TAGLN2P37802 199 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 PEX19P40855 299 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CEBPDP49716 269 aaPredicted RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CDK9P50750 372 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 DAP3P51398 398 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 AP1S2P56377 157 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 KCNJ2P63252 427 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 NIPAL1Q6NVV3 410 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CCDC137Q6PK04 289 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 OPN5Q6U736 354 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 TMIGD1Q6UXZ0 262 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 FRA10AC1Q70Z53 315 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 LUZP2Q86TE4 346 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 SKA3Q8IX90 412 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 SYCE1Q8N0S2 351 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 RNF175Q8N4F7 328 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 ACOT4Q8N9L9 421 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR2L5Q8NG80 312 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR13C2Q8NGS9 318 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 NUBPLQ8TB37 319 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 TCTEX1D2Q8WW35 142 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 AIF1LQ9BQI0 150 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 CCDC77Q9BR77 488 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 EXO5Q9H790 373 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 QPCTLQ9NXS2 382 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 TAS2R13Q9NYV9 303 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 MTRF1LQ9UGC7 380 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 PHF11Q9UIL8 331 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 KLHL21Q9UJP4 597 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 RABL2BQ9UNT1 228 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 PLLPQ9Y342 182 aa4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 RRP15Q9Y3B9 282 aaKnown RBP4.1□□□□□ -1.75
RNU4-39P-201ENST00000362455 SCN2AQ99250 2005 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 ROS1P08922 2347 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 C17orf51A8MQB3 221 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR10H3O60404 316 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRAPPC6AO75865 159 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 SCELO95171 688 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 RCBTB2O95199 551 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 SNX4O95219 450 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 WISP3O95389 354 aaPredicted RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 TGM6O95932 706 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 KRT14P02533 472 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 CT62P0C5K7 136 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR8U8P0C7N1 319 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 GCAP28676 217 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 PTGDSP41222 190 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 MAGEA8P43361 318 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 FBXW4P57775 412 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 STXBP1P61764 594 aaKnown RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 SKP1P63208 163 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 STX4Q12846 297 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 DOC2AQ14183 400 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 EBPQ15125 230 aaKnown RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 TSNQ15631 228 aaKnown RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 AANATQ16613 207 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 PDZK1Q5T2W1 519 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 Q6ZR54 194 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 MOB1BQ7L9L4 216 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRPM8Q7Z2W7 1104 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 LYG1Q8N1E2 194 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR2L13Q8N349 312 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 SVOPLQ8N434 492 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZPLD1Q8TCW7 415 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms