RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CNTNAP3Q9BZ76 1288 aa16.83■□□□□ 0.28
RTN4-201ENST00000317610 GHRLQ9UBU3 117 aa16.83■□□□□ 0.28
RTN4-201ENST00000317610 RHPN2P1A8MT19 583 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 FOLR1P15328 257 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 RCC1P18754 421 aaPredicted RBP16.82■□□□□ 0.28
RTN4-201ENST00000317610 S100A10P60903 97 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 CRIP3Q6Q6R5 217 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 Q6ZS52 159 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 UEVLDQ8IX04 471 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 OR14K1Q8NGZ2 314 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 ST6GALNAC5Q9BVH7 336 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 EHFQ9NZC4 300 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 PLA2G2EQ9NZK7 142 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 SHISA8B8ZZ34 492 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 SDCBPO00560 298 aaPredicted RBP16.82■□□□□ 0.28
RTN4-201ENST00000317610 HOXB5P09067 269 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 NME2P22392 152 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 ADH6P28332 368 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 SPEM2Q0P670 501 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 MYBPHQ13203 477 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 MFAP5Q13361 173 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 RBM39Q14498 530 aaKnown RBP16.82■□□□□ 0.28
RTN4-201ENST00000317610 APCDD1LQ8NCL9 501 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 LILRB1Q8NHL6 650 aaPredicted RBP16.82■□□□□ 0.28
RTN4-201ENST00000317610 MRGPRX4Q96LA9 322 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 GPER1Q99527 375 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 SMCO4Q9NRQ5 59 aa16.82■□□□□ 0.28
RTN4-201ENST00000317610 IGHV3-20A0A0C4DH32 117 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 C9JQL5 133 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 LMO7DNF2Z398 122 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 TRAF3IP2O43734 574 aaPredicted RBP16.81■□□□□ 0.28
RTN4-201ENST00000317610 CA11O75493 328 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 NAT2P11245 290 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 CDAP32320 146 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 PTGER4P35408 488 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 DVL1P1P54792 670 aaPredicted RBP16.81■□□□□ 0.28
RTN4-201ENST00000317610 F2RL1P55085 397 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 CFHR1Q03591 330 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 FAM219AQ8IW50 185 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 OR51T1Q8NGJ9 327 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 C2CD4CQ8TF44 421 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 GSKIPQ9P0R6 139 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 SERPINA5P05154 406 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 HPNP05981 417 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 CD38P28907 300 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 OR1D5P58170 312 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 HABP2Q14520 560 aaPredicted RBP16.81■□□□□ 0.28
RTN4-201ENST00000317610 C15orf54Q8N8G6 183 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 NFAM1Q8NET5 270 aaPredicted RBP16.81■□□□□ 0.28
RTN4-201ENST00000317610 POC1BQ8TC44 478 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 RLN3Q8WXF3 142 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 PECRQ9BY49 303 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 SLC22A11Q9NSA0 550 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 C1orf123Q9NWV4 160 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 SEMA5BQ9P283 1151 aa16.81■□□□□ 0.28
RTN4-201ENST00000317610 SERPINE3A8MV23 424 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 PRSS44E7EML9 344 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 RER1O15258 196 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 IFNA2P01563 188 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 IGLV3-1P01715 115 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 SHHQ15465 462 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 PLPPR5Q32ZL2 321 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 DHRS11Q6UWP2 260 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 TM2D1Q9BX74 207 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 TUBD1Q9UJT1 453 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 TIMM10BQ9Y5J6 103 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 IGHV1OR21-1A0A087WYE8 117 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 JTBO76095 146 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 SFTPBP07988 381 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 RPL12P30050 165 aaKnown RBP16.8■□□□□ 0.28
RTN4-201ENST00000317610 ECI1P42126 302 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 PTGFRP43088 359 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 ECH1Q13011 328 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 PPA1Q15181 289 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 HIST3H3Q16695 136 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 FAM76BQ5HYJ3 339 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 OR2A2Q6IF42 318 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 FAM57BQ71RH2 274 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 ZFP82Q8N141 532 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 PNLDC1Q8NA58 520 aaKnown RBP16.8■□□□□ 0.28
RTN4-201ENST00000317610 OR6X1Q8NH79 312 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 KIRREL1Q96J84 757 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 SULT4A1Q9BR01 284 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 C14orf166Q9Y224 244 aaKnown RBP16.8■□□□□ 0.28
RTN4-201ENST00000317610 MYO9BQ13459 2157 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 GON4LQ3T8J9 2241 aa16.8■□□□□ 0.28
RTN4-201ENST00000317610 IGHV1OR15-9A0A0B4J2B8 117 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 DEDDO75618 318 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 CTSSP25774 331 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 CD27P26842 260 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 MSX1P28360 303 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 CD80P33681 288 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 GRB2P62993 217 aaKnown RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 KISS1Q15726 138 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 IAH1Q2TAA2 248 aaPredicted RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 C1QL2Q7Z5L3 287 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 TGIF2Q9GZN2 237 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 IGLV3-32A0A0A0MS00 114 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms