RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TIGITQ495A1 244 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MS4A5Q9H3V2 200 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 KIAA0100Q14667 2235 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MYO18AQ92614 2054 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 THSD7AQ9UPZ6 1657 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 OR5H8P0DN80 308 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 S100A4P26447 101 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ADIRFQ15847 76 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ZNF788Q6ZQV5 615 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SSX8Q7RTT4 187 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SLC38A6Q8IZM9 456 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 AAMDCQ9H7C9 122 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ZNF331Q9NQX6 463 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 THYN1Q9P016 225 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 A0A0B4J2E0 115 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 A0A1B0GX12 115 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 FAM157AC9JC47 383 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 CHEK1O14757 476 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 HYAL3O43820 417 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 GP1BAP07359 652 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 HOXD4P09016 255 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 FUT3P21217 361 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 KIR2DS2P43631 304 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 FMODQ06828 376 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 BATFQ16520 125 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ETFRF1Q6IPR1 90 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 OTOSQ8NHW6 89 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 UBE2FQ969M7 185 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SMIM19Q96E16 107 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 GABARAPL1Q9H0R8 117 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 DNAJB12Q9NXW2 375 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 AQP7P3A6NL99 342 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 CCSO14618 274 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 PEX11BO96011 259 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SEMG1P04279 462 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 RHOBP62745 196 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TLE1Q04724 770 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 STAC2Q6ZMT1 411 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TMEM182Q6ZP80 229 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 OR13C5Q8NGS8 318 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 OR2G2Q8NGZ5 317 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MED30Q96HR3 178 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ADAM19Q9H013 955 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 HEXA-AS1Q9H8Q6 139 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TUBG2Q9NRH3 451 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 FOXJ3Q9UPW0 622 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 ARRDC5A6NEK1 342 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 H3BMH7 237 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 PRR35P0CG20 571 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 CDC20Q12834 499 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 HMGN3Q15651 99 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MOB1BQ7L9L4 216 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 OR13D1Q8NGV5 346 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 RNF141Q8WVD5 230 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 LRFN3Q9BTN0 628 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TMEM147Q9BVK8 224 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 DDA1Q9BW61 102 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 GABARAPL3Q9BY60 117 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 COA4Q9NYJ1 87 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 MRPS18BQ9Y676 258 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 HMX2A2RU54 273 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 RER1O15258 196 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 OPRK1P41145 380 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 KCNJ3P48549 501 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 OPCMLQ14982 345 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 CDK5R1Q15078 307 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 RPL7L1Q6DKI1 246 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 NUDCD2Q8WVJ2 157 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 PTP4A1Q93096 173 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 GMPPAQ96IJ6 420 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 RHNO1Q9BSD3 238 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 RSRP1Q9BUV0 290 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 SF3B5Q9BWJ5 86 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 TAF9BQ9HBM6 251 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 OR6C3Q9NZP0 311 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 LAMA4Q16363 1823 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 OR2M5A3KFT3 312 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 NKX2-8O15522 239 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 GPR6P46095 362 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 PIGPP57054 158 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 RAE1P78406 368 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 SKP2Q13309 424 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 GGTLC2Q14390 218 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 SPRED2Q7Z698 418 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 AMER3Q8N944 861 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 ZFP62Q8NB50 900 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 PATZ1Q9HBE1 687 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 PSG11Q9UQ72 335 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 PLPP3O14495 311 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 SPINT1O43278 529 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 FCGR3BO75015 233 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 LRP3O75074 770 aa6.17□□□□□ -1.42
GAPVD1-202ENST00000297933 DHRS3O75911 302 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms