RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 MS4A8Q9BY19 250 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 UBQLN3Q9H347 655 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ARID1AO14497 2285 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 IDSB3KWA1 339 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 M0R2Z0 102 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 HRO43593 1189 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 EIF4E2O60573 245 aaKnown RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 C11orf91Q3C1V1 193 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 PRSS36Q5K4E3 855 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 OR52N4Q8NGI2 321 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 PRR7Q8TB68 274 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 SLC37A2Q8TED4 501 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 OXGR1Q96P68 337 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF629Q9UEG4 869 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 IL17BQ9UHF5 180 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 H0YIV9 168 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 CLEC2LP0C7M8 214 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 UBALD1Q8TB05 177 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 C12orf57Q99622 126 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 GPR87Q9BY21 358 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 LYRM4Q9HD34 91 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 SLC22A13Q9Y226 551 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 TRDV1A0A1B0GX56 115 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 NID1P14543 1247 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 B2MP61769 119 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ATP6V1FQ16864 119 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 NUP37Q8NFH4 326 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 VN1R2Q8NFZ6 395 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 F2RL2O00254 374 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ARNTLO00327 626 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 POU3F3P20264 500 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 NOVA1P51513 510 aaKnown RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 GSCP56915 257 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 OR2J1Q9GZK6 312 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 CST9Q5W186 159 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 TIMP4Q99727 224 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 LYRM2Q9NU23 88 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-201ENST00000263708 IL36GQ9NZH8 169 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1W2PR80 420 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 FGF2P09038 288 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 BCL3P20749 454 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 SLC16A11Q8NCK7 471 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ISL2Q96A47 359 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 OR10C1Q96KK4 312 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 FAM181BA6NEQ2 426 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 FCN1O00602 326 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF195O14628 629 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CST7O76096 145 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 SDHAP31040 664 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ABI3BPQ7Z7G0 1075 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 OR4C16Q8NGL9 310 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 RTN4IP1Q8WWV3 396 aaPredicted RBP10.28□□□□□ -0.76
PTPN4-201ENST00000263708 TREX1Q9NSU2 369 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 FKBP11Q9NYL4 201 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 HRASP01112 189 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 MYOGP15173 224 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 SELENBP1Q13228 472 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 DUSP5Q16690 384 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 MARCH1Q8TCQ1 289 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 UBTD2Q8WUN7 234 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1W2PN81 502 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CHRNA7P36544 502 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 OTPQ5XKR4 325 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 THYN1Q9P016 225 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
PTPN4-201ENST00000263708 COL2A1P02458 1487 aaPredicted RBP10.28□□□□□ -0.76
PTPN4-201ENST00000263708 DRGXA6NNA5 263 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 FCGR3BO75015 233 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 VAMP5O95183 116 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CD82P27701 267 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF683Q8IZ20 524 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF561Q8N587 486 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 SLC25A46Q96AG3 418 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 PPP1CCP36873 323 aaKnown RBP10.28□□□□□ -0.76
PTPN4-201ENST00000263708 PJVKQ0ZLH3 352 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 RNF212Q495C1 297 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 Q6ZN92 141 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 NUDCD2Q8WVJ2 157 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 PDXPQ96GD0 296 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CSNK1DP48730 415 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 OR1C1Q15619 314 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CYS1Q717R9 158 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 VRK3Q8IV63 474 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 HEATR1Q9H583 2144 aaKnown RBP10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CBR3O75828 277 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 CDAP32320 146 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 KIR3DX1Q9H7L2 352 aa10.28□□□□□ -0.76
PTPN4-201ENST00000263708 PLEKHA2Q9HB19 425 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms