RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MED22Q15528 200 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 MPPED2Q15777 294 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 GSG1Q2KHT4 349 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 FAAP20Q6NZ36 180 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 C6orf15Q6UXA7 325 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 RPS19BP1Q86WX3 136 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 MFSD8Q8NHS3 518 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 RAB2BQ8WUD1 216 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 MGLLQ99685 303 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 AUNIPQ9H7T9 357 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 ELL3Q9HB65 397 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 PARPBPQ9NWS1 579 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 IKZF2Q9UKS7 526 aa4.77□□□□□ -1.65
TOPBP1-201ENST00000260810 H3BSH0 61 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 GPRIN2O60269 458 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PSPNO60542 156 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ALDOBP05062 364 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 FCER2P06734 321 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 P0C879 139 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 IL3RAP26951 378 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 APEX1P27695 318 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 HTR2CP28335 458 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CLDN12P56749 244 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 FGL1Q08830 312 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR176Q14439 515 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 BTBD16Q32M84 506 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PYDC2Q56P42 97 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CLVS2Q5SYC1 327 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 C3orf33Q6P1S2 294 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OPN5Q6U736 354 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 RNF113BQ8IZP6 322 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ADPRHL1Q8NDY3 354 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ATP6V1C2Q8NEY4 427 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR52N4Q8NGI2 321 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR2T4Q8NH00 348 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR6S1Q8NH40 331 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 GHSRQ92847 366 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM203Q969S6 136 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 C7orf50Q9BRJ6 194 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CNOT2Q9NZN8 540 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 GRHPRQ9UBQ7 328 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CLEC4AQ9UMR7 237 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ACOD1A6NK06 481 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR2T1O43869 369 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC43A1O75387 559 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 HPXP02790 462 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 FABP1P07148 127 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 IFI30P13284 250 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ABOP16442 354 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CDK2P24941 298 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CRABP1P29762 137 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TPTEP56180 551 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR8B8Q15620 311 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TP53I3Q53FA7 332 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 HIKESHIQ53FT3 197 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ARSJQ5FYB0 599 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR107Q5VW38 600 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 MEPCEQ7L2J0 689 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CMIPQ8IY22 773 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CCDC71LQ8N9Z2 235 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 SMIM19Q96E16 107 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ERMAPQ96PL5 475 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF251Q9BRH9 671 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TVP23BQ9NYZ1 205 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 MTCH1Q9NZJ7 389 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PADI1Q9ULC6 663 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 STUB1Q9UNE7 303 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PRELID1Q9Y255 219 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 AGRNO00468 2067 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 NOTCH3Q9UM47 2321 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM172BPA6NC97 362 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 EFCAB9A8MZ26 197 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 C21orf140B9A014 251 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 E7EUB6 86 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 MSX1P28360 303 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR3A3P47888 321 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR3A2P47893 321 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TAS2R31P59538 309 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 RAB11BQ15907 218 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 LINC00696Q6ZRV3 163 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PARP16Q8N5Y8 322 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ZBTB8BQ8NAP8 495 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 OR52E2Q8NGJ4 325 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PLPPR1Q8TBJ4 325 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 MR1Q95460 341 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 SPTSSAQ969W0 71 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 NARS2Q96I59 477 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 THOC3Q96J01 351 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 TTYH2Q9BSA4 534 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 C6orf62Q9GZU0 229 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 UNKLQ9H9P5 680 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PLSCR4Q9NRQ2 329 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 ERRFI1Q9UJM3 462 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC25A15Q9Y619 301 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 A0A1W2PPK0 400 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 PTGES3LE9PB15 166 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 IGKV1-39P01597 117 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 IGKV1D-39P04432 117 aa4.76□□□□□ -1.65
TOPBP1-201ENST00000260810 CXCL3P19876 107 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms