RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 OXGR1Q96P68 337 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GNG13Q9P2W3 67 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 WNK1Q9H4A3 2382 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A087WV48 116 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TRAPPC2LH3BP13 241 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ADAM10O14672 748 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GPR137BO60478 399 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CT45A8P0DMV1 189 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CT45A9P0DMV2 189 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RAC2P15153 192 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 EIF1P41567 113 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 MLF1P58340 268 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CT45A2Q5DJT8 189 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PLXDC2Q6UX71 529 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR9K2Q8NGE7 335 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR2AE1Q8NHA4 323 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RSRP1Q9BUV0 290 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 hCG_1809904A0A1W2PP81 198 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PR64 198 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PRV1 198 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 H7C1Q1 480 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 AQP8O94778 261 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SFT2D2O95562 160 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF660Q6AZW8 331 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NR2C2APQ86WQ0 139 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 SEMA6DQ8NFY4 1073 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ROBO4Q8WZ75 1007 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NINJ1Q92982 152 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 KISS1RQ969F8 398 aaPredicted RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RBMXL1Q96E39 390 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PGLYRP3Q96LB9 341 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CALHM2Q9HA72 323 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ICAM5Q9UMF0 924 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 PRSS44E7EML9 344 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 M0R135 149 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 HBE1P02100 147 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 RPUSD3Q6P087 351 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR5M8Q8NGP6 311 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 GPX8Q8TED1 209 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 WNT2BQ93097 391 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF799Q96GE5 643 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ADAT1Q9BUB4 502 aaKnown RBP4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ENY2Q9NPA8 101 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 FBXL17Q9UF56 701 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PP11 408 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 NMBP08949 121 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CD37P11049 281 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TBPP20226 339 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 FOLR3P41439 243 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 CARD18P57730 90 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 MGAT2Q10469 447 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF273Q14593 569 aa4.12□□□□□ -1.75
VPS13C-201ENST00000249837 TRIM77I1YAP6 450 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 FOLR1P15328 257 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 TLE1Q04724 770 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 MMP26Q9NRE1 261 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 MMP24Q9Y5R2 645 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 LOC105371267A0A1B0GV96 52 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PPH5 198 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 FAM166BA8MTA8 275 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 LMO7DNF2Z398 122 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 SIGLEC6O43699 453 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 RAB4BP61018 213 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 AADACL3Q5VUY0 350 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 CST9LP1Q5W188 147 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 KLK13Q9UKR3 277 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 YBX2Q9Y2T7 364 aaKnown RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 ANKRD30BLA7E2S9 258 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 CXCL13O43927 109 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 IAPPP10997 89 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 RCC1P18754 421 aaPredicted RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 RRADP55042 308 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 CNN3Q15417 329 aaKnown RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 GGNBP1Q5YKI7 109 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 OR51H1Q8NH63 302 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 RGP1Q92546 391 aaPredicted RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 OCSTAMPQ9BR26 566 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 CHD3Q12873 2000 aaKnown RBP4.11□□□□□ -1.75
VPS13C-201ENST00000249837 H2AFB1P0C5Y9 115 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 RFC3P40938 356 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 PNLIPRP2P54317 469 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 GUK1Q16774 197 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF813Q6ZN06 617 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 SLC25A42Q86VD7 318 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 THNSL2Q86YJ6 484 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 OR1N1Q8NGS0 311 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 NPAS1Q99742 590 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 CDH20Q9HBT6 801 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 WASF3Q9UPY6 502 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 B4GALT1P15291 398 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 APLNRP35414 380 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 MESTQ5EB52 335 aa4.11□□□□□ -1.75
VPS13C-201ENST00000249837 STPG2Q8N412 459 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms