RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 F5H5K5 113 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 PET100P0DJ07 73 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 BLVRBP30043 206 aaPredicted RBP16.47■□□□□ 0.23
CPSF3-201ENST00000238112 LSM6P62312 80 aaKnown RBP16.47■□□□□ 0.23
CPSF3-201ENST00000238112 EIF3IQ13347 325 aaKnown RBP16.47■□□□□ 0.23
CPSF3-201ENST00000238112 AADACL3Q5VUY0 350 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 ZNF585AQ6P3V2 769 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 FADS6Q8N9I5 356 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 OSGIN2Q9Y236 505 aa16.47■□□□□ 0.23
CPSF3-201ENST00000238112 E9PLN8 166 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 STMND1H3BQB6 276 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 ABCD4O14678 606 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 SERPINA2P20848 420 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 MSR1P21757 451 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 THBS4P35443 961 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 CSNK1A1P48729 337 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 PLEKHN1Q494U1 663 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-201ENST00000238112 PABPC1L2AQ5JQF8 200 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 GUSBP11Q6P575 273 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 MAFIPQ8WZ33 124 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 LYZL4Q96KX0 146 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.46■□□□□ 0.23
CPSF3-201ENST00000238112 OR5AC2Q9NZP5 309 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 PURGQ9UJV8 347 aaKnown RBP16.46■□□□□ 0.23
CPSF3-201ENST00000238112 C5orf63A6NC05 138 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 MSGN1A6NI15 193 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 NUDT19A8MXV4 375 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 GPR31O00270 319 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 TP53I11O14683 189 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 CD79AP11912 226 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 LYL1P12980 280 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 ICAM2P13598 275 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 GLRA1P23415 457 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 CTSSP25774 331 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 SHBQ15464 509 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 CHRFAM7AQ494W8 412 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 C1QL2Q7Z5L3 287 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 GJC3Q8NFK1 279 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 C2orf50Q96LR7 162 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 PECRQ9BY49 303 aa16.46■□□□□ 0.23
CPSF3-201ENST00000238112 ELL3Q9HB65 397 aaPredicted RBP16.46■□□□□ 0.23
CPSF3-201ENST00000238112 ACTL6AO96019 429 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 HPNP05981 417 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 ZNF385CQ66K41 422 aaPredicted RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 BHLHE23Q8NDY6 225 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 OR10C1Q96KK4 312 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 AQP10Q96PS8 301 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 SLC26A1Q9H2B4 701 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 NELFAQ9H3P2 528 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 ZNF629Q9UEG4 869 aaPredicted RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 SERPINE3A8MV23 424 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 DHRS3O75911 302 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 RAB32Q13637 225 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 PPP1R3BQ86XI6 285 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 EMG1Q92979 244 aaKnown RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 GSKIPQ9P0R6 139 aa16.45■□□□□ 0.22
CPSF3-201ENST00000238112 C14orf166Q9Y224 244 aaKnown RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 CHCHD2Q9Y6H1 151 aaPredicted RBP16.45■□□□□ 0.22
CPSF3-201ENST00000238112 IGHV5-10-1A0A0J9YXX1 117 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 ZNF705EA8MWA4 302 aaPredicted RBP16.44■□□□□ 0.22
CPSF3-201ENST00000238112 F8W036 122 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 NAT2P11245 290 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 FCGR2AP12318 317 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 PNLIPP16233 465 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 FAHP16930 419 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 S100A10P60903 97 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 BLOC1S1P78537 153 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 CCL7P80098 99 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 ARL6IP1Q15041 203 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 PUSL1Q8N0Z8 303 aaKnown RBP16.44■□□□□ 0.22
CPSF3-201ENST00000238112 RHBDD1Q8TEB9 315 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 PP6455Q8WZ26 134 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 OR2S2Q9NQN1 319 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 MMP26Q9NRE1 261 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 ZNF701Q9NV72 531 aaPredicted RBP16.44■□□□□ 0.22
CPSF3-201ENST00000238112 MEMO1Q9Y316 297 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 CEP192Q8TEP8 1941 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 A0A0U1RQV5 110 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 A0A1W2PQM1 296 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 FIGNL2A6NMB9 653 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 FOXI3A8MTJ6 420 aaPredicted RBP16.44■□□□□ 0.22
CPSF3-201ENST00000238112 DKK1O94907 266 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 KNG1P01042 644 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 IGLV3-1P01715 115 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 HOXB5P09067 269 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 ADCYAP1P18509 176 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 CPT2P23786 658 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 SURF2Q15527 256 aaPredicted RBP16.44■□□□□ 0.22
CPSF3-201ENST00000238112 UBE2V2Q15819 145 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 SPEM1Q8N4L4 309 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 POC1AQ8NBT0 407 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 CNTNAP3BQ96NU0 1288 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 V9GYS6 101 aa16.44■□□□□ 0.22
CPSF3-201ENST00000238112 CSTBP04080 98 aaKnown RBP16.43■□□□□ 0.22
CPSF3-201ENST00000238112 SCRN3Q0VDG4 424 aa16.43■□□□□ 0.22
CPSF3-201ENST00000238112 STK11Q15831 433 aa16.43■□□□□ 0.22
CPSF3-201ENST00000238112 GUCA2BQ16661 112 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms